KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111804314
Entry
111804314         CDS       T05351                                 
Name
(RefSeq) WD repeat-containing protein 44-like
  KO
K20241  WD repeat-containing protein 44
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cpep04131]
    111804314
Membrane trafficking [BR:cpep04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    111804314
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_TEP1_2nd ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd WDR55 Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_WDR35_TULP_N NBCH_WD40 Beta-prop_EML Beta-prop_TEP1_C Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_DCAF12 WDR90_beta-prop_4th WD40_like WD40_RFWD3 Beta-prop_HPS5 Beta-prop_EIPR1 RMC1_N Beta-prop_WDR19_1st Ge1_WD40 WDR54
Other DBs
NCBI-GeneID: 111804314
NCBI-ProteinID: XP_023544841
LinkDB
Position
LG10:complement(2022579..2028518)
AA seq 667 aa
MLSSDGDADVFFDSEDYLPLEESLVTEEVDASKSGYEIWMREPQSIKKRREYFLQEVGLN
EFASSSSTRTQDSEIESSCSSGRIELDRLTECSGAVSSSDYAPSCNVEDNDSVVHHNDVQ
SAEFSNEANEANEANEATSRPSSVSDSSFQRCQGEGNVEACKDIDARKKKILTWWKSLKN
KAARLRAMEFSEESKSNPAKSESCRMKVCQNKKKCSEFSALYMRQQICAHKGLIWTMKFS
PDGKYLASGGEDGVVRIWRVTRTNASSEFLANDATREGKSSFSSKPLRFATVVIPAKVFQ
IDELPIQEFHGHSSDVLDIAWSTSNCLLSSSKDKTVRLWQVGSDQCLNVFHHKNYVTCIQ
FNPMDENYFVSGSIDGKIRIWGVLKQRVVDWADIRDAITAISYQPDGKGFAVGSITGSCR
FYKTSGDDYINLDEQINIGGRNKASGKRITGIQFFRENSQRVMITSEDSKVRIFEGTKIV
GQYKGLSKSGSQMSASFTENGKHIVSVGEDSRVYMWNYDSVRLSSTNETKSQQSCEHFFS
DGVSVAIPCPGTGTEPKCLGNSQPQLSQRRDNQGDDSGLECFSFSNWFSANGLCRGSATW
PEERLPLWDLPVAEDEHQDCHQKKLNGHNGDAHDQGSRLETWGLVIVVAGLDGTIKTFHN
YGLPIKL
NT seq 2004 nt   +upstreamnt  +downstreamnt
atgctgagctctgatggagatgcagatgttttcttcgactcggaagattacttgccattg
gaggagtccttggtaaccgaagaagtcgatgcgagcaagtcgggatatgaaatatggatg
agagagcctcagagcattaagaagagaagggaatattttcttcaagaagttggtttgaat
gaatttgcatcttcttcaagtactcgtacacaggattcagagattgaatctagttgttca
tcagggaggatagaattggacagactcacagagtgtagtggagctgtttcaagctctgac
tatgcacctagctgtaatgtagaagacaatgattcagtagtacaccacaatgatgtgcaa
agtgctgaattcagcaacgaggcaaacgaggcaaacgaggcaaacgaggcaaccagtcga
ccatcttctgtttccgactccagctttcaacggtgccaaggtgaaggtaacgtcgaagct
tgcaaggatatcgatgcgaggaaaaagaagatactgacttggtggaaatccttaaaaaac
aaggcagcaagactacgagctatggagttttctgaggaatcgaaatcaaatcctgcgaaa
tccgaaagttgcagaatgaaggtgtgccaaaacaaaaagaagtgttcagaatttagtgca
ttgtatatgagacagcagatttgtgctcacaagggcttgatttggacaatgaagtttagt
ccagacgggaagtatttggcaagcggaggagaagacggagtcgttcgcatttggcgtgta
acacgtacaaatgcctctagtgagtttttagcaaatgacgccacaagagaagggaagtct
agtttcagcagtaaaccgttgagatttgccactgttgtcattcctgctaaggtttttcag
atagatgagttgccaatacaagaattccacggacattcaagtgatgtcttggatatagct
tggtctacttcaaactgtcttctttcatcctcaaaggataaaaccgtgcgcttgtggcaa
gttggttcagatcaatgtctcaatgttttccaccataaaaactacgttacttgtatccaa
ttcaatccaatggatgaaaactacttcgtcagtggctcaatcgatggaaaaattcggatt
tggggcgtcttgaagcagcgtgtggtcgattgggctgatatccgagatgcaattaccgcg
atatcttatcaaccagatgggaaggggtttgctgttggttctatcactggcagttgccgt
ttctacaaaacatcaggagatgattatatcaatctggatgaacagatcaatattggcggt
agaaataaagcctcgggtaaaaggatcactggcattcagtttttccgagagaactctcaa
agagtgatgataacttcggaagactctaaagtacgcatatttgaaggaaccaaaatcgtc
ggccaatacaaaggtctatcgaagtcgggtagtcaaatgtctgcttcctttacagaaaat
ggaaaacatatagtatctgttggagaggattctcgtgtatatatgtggaactacgatagc
gttcgtctttcgtcgacgaacgagacgaaatctcagcagtcttgtgagcatttcttttct
gatggtgtgtctgttgctataccatgtcctggcactggaactgaaccaaagtgcttgggt
aacagccaaccacagttgtcacagagacgggataaccaaggggatgacagtggtttggag
tgtttttcgttcagtaattggttctctgccaatggtctgtgccgaggttctgcaacatgg
ccagaagagagactacctctctgggatttaccagttgcagaagatgaacaccaagattgt
catcaaaagaaactaaatggccataacggcgacgcccacgaccaaggatctcgactcgaa
acatggggccttgtgattgtcgtggctggattagatggaactataaagacattccacaac
tatggattgcccatcaagctttag

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