Cucurbita pepo subsp. pepo (vegetable marrow): 111804386
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Entry
111804386 CDS
T05351
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic-like isoform X1
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpep03000
]
111804386
Transcription factors [BR:
cpep03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
111804386
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Paralog
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_6
zf-met
zf-C2H2_jaz
zf-C2H2_STOP2_C
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
111804386
NCBI-ProteinID:
XP_023544943
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Position
LG01:complement(5200166..5202241)
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AA seq
554 aa
AA seq
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MAASSSSSLPVYGVGEEASPQMRPPSSSSTKKKRNQPGTPSKYYPDAEVIALSPKTLMAT
NRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKDPKRKVYLCPEPTCVHHHPSRAL
GDLTGIKKHYSRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSF
ITHRAFCDALAQESSRHPPSIGRHLYGAQENPNIINQSAPGHFTHLLPSSMGSSFRPMSA
SPPFFLTEQNNQSSFHEDQPNQSQQGFFGNKGFHGVMQFPDIQSHTNNCASNVFNLGFIP
NSTSEGTTNLSNNNDTNTITTNLNQFSATNNANNQAAASNIFAVIGDQMNSAALPSLYSN
ASAVGGGGGSGIGGSFPHMSATALLQKAAQLGSTTSSTNTTSTLLRSFGSSSNSGGKASD
RTLFPLSYGGVTFGEHESNLQDMMNSFGSGSSGSGMFGSGMNSFGGLECSSSRTNMETLE
DPKLQQDVRGVRMGGTDRLTRDFLGVGQIVRSMSGGGGGGYSQKQGAEGIVLEGNERNSA
PSSQGFGGGNGNYQ
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggctgcatcttcttcttcctcacttccagtttatggcgttggagaagaagcatctccc
cagatgaggcctccctctagttcttccactaagaaaaaaagaaaccaaccaggaactcca
agcaagtattacccagatgcggaggtcatagccttgagtcccaagaccctaatggctaca
aacagattcatttgtgaagtttgtaacaaagggtttcaaagagagcaaaaccttcagctt
catagacgtggtcacaacttgccttggaagctaaagcagaagtccactaaagaccctaag
cgcaaggtttacttatgtcctgaacccacatgtgtccaccaccacccttctagggccctt
ggtgacttaaccggcatcaaaaaacactactctagaaaacatggcgagaagaaatggaag
tgtgataagtgctctaagcgttacgccgttcagtccgactggaaagctcactccaaaacg
tgcggtactcgcgagtatcgttgcgattgtggcactctcttctccagacgggatagtttt
attactcatcgagctttttgtgatgcattggctcaagaaagttctaggcatcctccaagt
attggaaggcatttatatggagctcaagagaatcccaatatcattaatcaatctgctcct
ggacattttactcatctccttccttcatccatggggtcgtcctttcggcccatgtcggcg
tcaccgccgttcttcttgacggagcagaataatcagagtagcttccatgaggatcagcca
aaccaatcccaacaagggttctttggaaacaaggggtttcatggggtgatgcaattccct
gatatccaatcccataccaataattgtgcttccaatgtcttcaatttggggttcatacca
aattctactagcgagggtactaccaatttgagcaataacaatgacaccaacactattact
accaatttgaatcaattcagtgccacaaacaatgccaacaatcaagctgctgcctctaac
attttcgccgtaatcggcgatcagatgaattcagctgcactcccatctctctacagcaat
gcctcggctgtcggtggtggaggcggtagtggtatcggtggttcgttcccacatatgtcg
gcgacagcgcttcttcagaaggcagctcaattgggttcaacgacgtcaagtaccaacacg
acatcgacgttgctaaggtcgtttggaagctcctcgaactcaggggggaaagcgtcagac
agaacgcttttcccattgagttacggaggagtaacattcggggaacatgagagcaatctt
caggatatgatgaattcatttggaagcgggagctcgggaagtgggatgttcgggagcggg
atgaactcgttcggtggattggagtgcagtagtagtagaaccaacatggaaacgttggag
gatccaaagttacaacaggatgtaagaggagtgaggatgggagggacagataggttaaca
agagacttcctaggcgttggacagattgtaagaagcatgagtggcggcggcggcggcggt
tattcacagaaacaaggggcggaggggattgttttggagggaaatgagaggaattcagcg
ccgtcaagtcaaggttttggcggtggaaatggaaactaccagtga
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