Cucurbita pepo subsp. pepo (vegetable marrow): 111804393
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Entry
111804393 CDS
T05351
Name
(RefSeq) autophagy-related protein 13b
KO
K08331
autophagy-related protein 13
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
111804393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpep04131
]
111804393
03029 Mitochondrial biogenesis [BR:
cpep03029
]
111804393
Membrane trafficking [BR:
cpep04131
]
Autophagy
Autophagosome formation proteins
ULK complex
111804393
Atg1 complex
111804393
Mitochondrial biogenesis [BR:
cpep03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
111804393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
111804393
NCBI-ProteinID:
XP_023544947
LinkDB
All DBs
Position
LG10:complement(2065492..2069412)
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AA seq
636 aa
AA seq
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MASSHNTHSETAKVEQILTEFFPKTLQIILESRSPCISSRNFSGDQVLCSPSSSSSSSSS
MRPRDKWFNLALRECSATLENIDLWRPSYHEPMVIDVILVQREFGLDSVNASPRKDLVRN
LSLKDKHPFSLNSDKEEFGCQTKSEKVVERWMVHYESRKNRDTNSGCRRSTNSTAHTYKK
TILLLRSLYAFVRLLPAYKVFQDISSSGQIHPFTLVHRVSSFVEPFTRREEAEMQRFVFT
PVDTSCGRLCLSVLYRASLSDISSEPSTPMSPQVIPEYVGSPLTDPLKRFPTLPVSIAPS
HGSPSSLQFSRRHSWSYDRFRPSPPLVSFSPSPTYSESHALVSNPAFCRLPPSSLPSQPA
EMAMGHKDNVNYDEYYPSPVFSPSPSLSPPIGIPVRRLPNGLLQSESAPQSAPIAKLPHS
PALSSKPNLSPSSPLKASGPGIPLPAGSAIRKSFSLGRDESRRISGWRVSSNNSPISRSS
SRSFPDDLDDPEFPCPFDVDEDEMTDRGSRPESFDQKGNICEMLEPGGFFPIRKSQDAAV
GALVRMLQKAPPLRQDFTDSAADLVRPSTPDSPSRNPQQGTQISKSLASKGRYAASSSIT
TSGLFVPKTTADALEELQSYREMKNLLLRQAGKSPI
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttctcataatactcattccgagactgcaaaagttgagcaaattcttactgaa
ttcttccctaaaacgctacaaatcatacttgaatcgaggtccccttgtatttcatcgcgt
aatttcagtggtgatcaagttttgtgttctccatcttcctcctcctcctcctcttcgagt
atgaggccgagggataagtggttcaatttggcccttcgtgaatgctctgctacgttagag
aatattgacctctggcgtcctagctatcacgaacccatggtcatagatgttattttggtg
caaagggaatttggtttagactctgtgaatgcttctcctaggaaagatcttgttaggaac
ttgtctttgaaagacaaacatccattttctttgaattctgataaggaagagtttggatgt
caaaccaagagtgagaaggttgtagagagatggatggttcattatgaaagtaggaagaac
cgggatactaattctggctgcagaaggtctactaatagcactgcacacacttacaagaaa
accattttactcttaagatctttatatgcctttgtgaggcttttacctgcttataaggtt
tttcaagatatcagttcatctggtcaaattcacccatttacacttgttcatcgtgtgtcg
tcctttgttgagcctttcactcgaagagaagaggccgaaatgcagcgtttcgtgttcact
cctgtggacacttcttgtggtagactctgtctctctgtgttgtaccgtgcatccctttct
gatataagctctgaaccatcaactcctatgtcgcctcaagttattcctgaatatgttggg
agcccattgacagatccattgaaaaggtttccaacactccctgtatcgatagccccatcc
catggatctccatcgtcgttacaattctcgagacgtcatagttggagttatgaccgcttt
agaccctccccccctttggtctccttttcaccttcgccaacgtattcagaatctcatgct
ttagtttcgaatccagccttttgccgcttgcctccttcgagcttaccttcacaaccagct
gaaatggctatgggacataaagataatgtgaattatgatgaatattatccttctcctgtc
ttttccccctcaccctcgttgtcgccaccaattggtattcctgtaaggcgattgccgaat
ggtctattgcagtctgaaagtgctcctcaaagtgcacctatagcaaagcttccccattcc
cctgcattatcaagcaaaccgaatttgtcgccatcctctccccttaaagcttctgggccg
ggtattccattgcccgctggctctgcaattagaaagtcattttctcttggaagagacgaa
agccgaagaatttcaggctggagggtatcgtcgaataactcaccaatttcaagaagctcc
agtagatcttttccagatgatcttgatgatccagagtttccctgcccctttgatgtggat
gaggatgagatgacggatagaggtagcagacctgaatcctttgaccaaaaaggaaacatt
tgtgagatgctggaacccgggggattcttcccaatccgtaaatctcaagacgctgccgtt
ggcgctctagtacgtatgcttcaaaaagctccaccacttcgccaggacttcaccgattca
gccgcagatcttgtacgaccctcgacacccgattccccaagcagaaatccccaacaggga
actcagatatctaaatcattggcttcaaagggccgctatgctgcctcctctagtatcaca
acctctggtctttttgtgcctaaaactacagctgatgcattggaagaactacagagctac
agagagatgaaaaatttgttgctcaggcaagctggaaagagtcccatatga
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