Cucurbita pepo subsp. pepo (vegetable marrow): 111804717
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Entry
111804717 CDS
T05351
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 5
KO
K05391
cyclic nucleotide gated channel, plant
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
111804717
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpep04040
]
111804717
Ion channels [BR:
cpep04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
111804717
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
IQ
Motif
Other DBs
NCBI-GeneID:
111804717
NCBI-ProteinID:
XP_023545245
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Position
LG11:6853869..6866128
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AA seq
734 aa
AA seq
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MFDCGYKSQLMGGQREKFVRLDDLDSRLSSPSDSGMRRCGFNIDGFNRAVNGNDKSSGSF
KRGMRKGSEGLKSIGRSLKFGVSRAVFPEDLKESKMKIFDPQDKLLLFFNKLFVISCFLA
ISVDPLFFYVPVINGNSNCLGIDRKLAITVTTLRTIIDVFYLVHMALQFRTAYIAPSSRV
FGRGELVIDPTQIAKRYLRRYFIIDLVSVLPLPQIVVWRFLQRSKGSDVYVTKQALLLIV
FLQYIPRFLRAVPLTSELKRTTGVFAETAWAGAAYYLLLYMLASHIVGALWYLLAVERND
TCWQKYCKAPICRKDFLYCGNQGMEGYATWNQTGVDGIKSSCKPADDNDQFDFGIFKQAL
SSGIAASKSFIVKYCYCLWWGLQNLSTLGQGLQTSTYPGEVIFSIALAVLGLILFALLIG
NMQTYLQSLTIRLEEMRVKKRDSEQWMHHRLLPQELRERVRRYDQYKWLETRGVDEQSLV
QTLPKDLRRDIKRHLCLALVRRVPLFENMDERLLDAICERLKPCLFTEYTYIVREGDPVD
EMLFIIRGRLESVTTDGGRSGFFNRTFLKEGDFCGEELLTWALDPKSGSNLPTSTRTVKA
ITEVEAFALVAEELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYSKRKS
LELRQKEEVAAEESEGAQTTTSGGSYSIRATFLASKFAANALRGVQRYRNAKSAQELIKL
QKPPEPDFTADDAD
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattgtggttacaagtcacaactgatgggtggtcagcgagaaaagtttgtgagg
ttggatgacttggactccagattgtcatcgccttctgatagtggaatgagaagatgtggt
tttaatatagatggatttaaccgtgcagtcaatggaaatgataagtcgtctggatccttt
aagagaggaatgaggaaagggtctgaaggacttaaatcaattggccgatcactcaagttt
ggagtgtctcgagctgtatttccagaggatcttaaagagtcaaagatgaagatcttcgac
cctcaagacaaattgctcttatttttcaataaactttttgtcatatcatgttttttggca
atatctgtggacccactgttcttttatgttcctgttattaatggaaactcaaactgtctt
ggcattgatagaaagctggcaattacagtgacaacattgcggacaattattgatgttttc
tatcttgtccacatggctctccaattccggacagcttatattgctccatcatctcgggtg
tttgggagaggtgaacttgtgattgatcctacacaaattgcaaagcgatacttgcggcgg
tatttcatcattgatttggtgtctgtgctgccccttccacagattgtggtttggagattt
cttcagaggtcaaaaggttccgatgtatatgtgacaaaacaagcccttcttttaattgta
ttcctacaatatatcccaagatttcttagagcggtaccattgacttcagaattgaaaagg
acaacaggtgtatttgctgaaactgcttgggcaggtgctgcatattatttgctattatat
atgcttgcaagtcatatagttggagcattatggtacttgttagctgtggaacgcaatgat
acatgttggcagaagtattgtaaggccccgatttgcaggaaagatttcttatattgtggt
aaccaaggcatggaaggttatgcaacttggaaccagacaggtgtggatggcattaagtca
agttgcaaacctgctgatgataatgatcagtttgattttggaatctttaaacaggctctg
tcctctggtattgccgcatctaagagttttatcgttaaatattgttactgtctgtggtgg
gggctacaaaacttaagtacgcttgggcaggggcttcaaacaagcacgtacccgggtgaa
gtgatcttttctattgcattagctgtacttggtctcatcctctttgctcttcttattggc
aacatgcagacttatcttcaatctctaaccataagacttgaggagatgagggtgaaaaag
cgtgattcggagcagtggatgcaccatcgcttgctgccacaggagcttcgggagagagtc
aggcgttacgatcagtacaagtggttggagacccgtggggtggatgaacagagtttggtt
caaactttacccaaggatcttaggagagatattaagcggcatctttgtcttgctttagta
agaagggttcctctgtttgaaaacatggacgaaaggctgcttgatgctatttgtgagcgg
ctgaaaccatgtttgtttacggagtacacttacatagtccgtgaaggtgatccagttgat
gagatgcttttcattatacgtggtcggctcgagagtgtgaccacggatggcgggcggagt
ggatttttcaaccgtacctttttgaaagaaggtgatttttgtggtgaggagcttttgacc
tgggctctagacccgaaatctggttcgaatcttccaacttctacaaggactgtaaaggct
attacagaggttgaggctttcgcccttgttgctgaagagttgaaatttgtggccagtcag
ttcaggcgccttcacagtagacaggtacaacataccttccgattttactcgcagcaatgg
aggacctgggcagcttgcttcatccaagcagcgtggcgtcggtattccaagagaaagtct
ttagaacttcgtcaaaaggaagaagttgcagcagaagaatctgagggagctcaaactact
acaagcggaggatcttatagtattcgtgcaacgttcttagcttccaaatttgctgccaat
gctctccgtggcgttcagcgatatcggaacgcgaaaagcgctcaggaattgataaaattg
cagaagcctccagagccagattttaccgctgatgatgcggattga
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