KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111804901
Entry
111804901         CDS       T05351                                 
Name
(RefSeq) coilin-like isoform X1
  KO
K13150  coilin
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cpep03041]
    111804901
Spliceosome [BR:cpep03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    111804901
SSDB
Motif
Pfam: Tudor_Coilin Coilin_N
Other DBs
NCBI-GeneID: 111804901
NCBI-ProteinID: XP_023545487
LinkDB
Position
LG11:193910..197704
AA seq 571 aa
MNSGTVRVRLVFEEGRLLSKPQRRNGLKRSWILLKSHLHSISDFSSYLLDLFLLRDACPH
GLLLSMDGFVLPPFEPTSILKDGDIVRVKKSEDNVIAVETMADMEEGQPAGLDVQLLANE
ELVKECTDYKNEAEQDDEHYDLLNQLEDTVDVGSKEKTVCRKRKALKTVHSSKKKKNRFA
PTDKCLASPSNLQQFHTDHNCRSQQEVSVSDKSLVEKRKSSNGNTGTNKKQKVRKQVQQR
IVRNSNGKLPVENYFEDSEQLDDSSVDEGIVPVETRPGHVRFLPLDQGEANQFVHPAQAS
MDTARSNGITIKNEKKWGKGKSSFWRSNCNCEGQSSKSQAKKDSSTRKCPIDFNELRPCL
SLPERGDIIAYRLIELSSSWTPEFSSFRVGKVSWCNPEANKIMLIPVPEYPFVFKAMNEE
AVKHPYAEDGSLKADYSSLVDIRIVEHENSLGFEAAGGGNISEASTSKQSWSKWEKHSIA
PKQSWNKWENQPRAPKQSWKKWENDTSKQGENQPRASKQSWKKWENDTSKRENGKENAWD
DIVQASSAKKANLSKDVGWGRGEKKSWKGAS
NT seq 1716 nt   +upstreamnt  +downstreamnt
atgaattcggggacagtaagagtgcgtttggttttcgaagaggggcgcctactgagcaag
ccgcagaggagaaatggactgaaacggagttggattcttctgaaatcccacctccattcc
atttccgacttctcctcctatcttctcgaccttttccttcttcgcgatgcttgtcctcat
ggcctccttctttctatggatgggtttgttctaccaccctttgagcctacttctattttg
aaggatggagatattgttagggtgaagaagagtgaggacaatgtgattgcagttgagacg
atggcagacatggaggaggggcaacctgctggtctagatgttcagcttctagccaacgag
gagcttgtgaaggagtgcactgactacaaaaatgaagcagaacaagatgatgaacattat
gatctgctgaatcagttggaagacacagtggatgtgggaagcaaagagaaaacagtttgc
aggaaaaggaaggcactgaaaacagttcacagctcaaagaagaagaagaatagatttgct
ccaactgacaaatgtctggcttctccatcaaatcttcagcagtttcatacagaccataat
tgtagatcgcagcaggaagtttctgtttctgataagagtctggtcgagaagcgcaaatca
tccaatggcaatactggtacaaacaagaagcaaaaggttcgtaaacaggtacagcaacga
atagttcgaaatagtaacggtaagttacctgttgagaattactttgaggactctgaacag
ctagatgacagtagtgttgatgaaggaattgtccccgtggaaactagaccaggacatgtt
cgttttctgcctcttgatcaaggagaagctaaccagtttgtgcatccagctcaagcttct
atggacaccgcgcggtcaaatgggataacaattaagaatgaaaaaaaatggggtaaaggg
aaatcctcattttggaggagtaattgcaactgtgaaggacaaagttccaagtcgcaagct
aaaaaagattcatcaactaggaaatgtccaattgacttcaatgaactcagaccttgtttg
agcttgcccgagagaggtgatataattgcatatcgtttaattgaattatcatcatcatgg
actccagaattttcctccttcagagttggaaaggtatcatggtgtaatcctgaagcaaat
aagattatgctgattcctgttccagaatatccatttgtttttaaggcaatgaacgaggaa
gcagtcaagcatccatatgcggaagatgggtctttaaaggctgattactcctcactcgtt
gacatcagaatcgttgagcatgaaaactcactaggttttgaagcagctggtggtggtaat
attagtgaagcatctacttcaaaacaaagctggagcaagtgggagaagcattccattgca
ccaaaacaaagctggaacaaatgggagaaccagcccagagcaccaaaacaaagctggaaa
aagtgggaaaacgataccagtaaacaaggggagaaccagcccagggcatcaaaacaaagc
tggaaaaagtgggaaaacgataccagtaaacgggaaaatggaaaggaaaatgcatgggat
gacattgtccaggcttccagcgcgaagaaggctaatttgtccaaggacgttggatgggga
agaggggagaagaaatcttggaaaggagcttcataa

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