Cucurbita pepo subsp. pepo (vegetable marrow): 111804904
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Entry
111804904 CDS
T05351
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep00040
Pentose and glucuronate interconversions
cpep01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111804904
Enzymes [BR:
cpep01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
111804904
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
111804904
NCBI-ProteinID:
XP_023545498
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Position
LG11
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AA seq
406 aa
AA seq
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MEIPSFLPIITFTLLLQMCAISSSPVSDPELVVQEVLSSINNATTRRNLGFLSCGTGNPI
DDCWRCDPNWEKNRKRLADCGIGFGKRAIGGKNGKFYVVTDPSDKDVVNPKPGTLRHAVI
QKEPLWITFKRDMVIKLKAELLMNSFKTIDGRGVSVHIAGGPCITIQYVTNIIIHGINIH
DCKQGGNTYVRDSPEHYGWRTLSDGDGVSIFGGSHVWIDHCSLSNCRDGLIDAIHGSTAI
TVSNNYMTHHNKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDY
THWIMYAIGGSASPTINSQGNRYLAPNNRDRKEVTKREDAPQSKWKNWNWRSSGDLMLNG
AFFTRSGAGSSSSYARASSLSAKSSSLVSTMTAGAGVLRCRKGSRC
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggaaattccaagttttcttcccataataaccttcacccttcttctccaaatgtgcgcc
atttcatcttctccagtctccgaccctgaactagtcgtccaagaagttctctcgagcatc
aacaatgcaacaacgagaaggaatttggggttcctttcctgtggaactggaaacccaata
gacgattgttggaggtgcgaccctaattgggagaagaatcgaaagcgtctagccgactgc
ggcattgggttcgggaagcgagccatcggcggcaaaaacgggaaattctacgtagtcact
gacccatccgacaaggacgtggtgaacccaaaaccaggcactcttcgccacgccgtaatc
caaaaggaacccttatggatcacctttaaacgcgacatggtcatcaaattaaaagcagag
ttgctgatgaactctttcaaaaccatcgacggtcggggtgtgtcggtccacatagccggt
gggccttgcattacaattcagtatgtgaccaacattatcatccacggcatcaacattcac
gactgcaagcaaggtgggaacacgtacgttagagattcgccggagcattatggttggagg
actctgtcggacggcgatggggtttcgatatttggaggcagccatgtttggatcgaccat
tgctctttgtcgaattgtcgtgatgggctaattgatgcgattcatgggtctacagccatc
actgtttccaacaattacatgacccaccataacaaagttatgcttttaggacacagtgat
tcgtatactcaagacaagaacatgcaagtcaccattgctttcaaccattttggtgagggc
cttgtccagagaatgccacgatgccggcatgggtactttcatgtggtgaacaatgactac
actcattggataatgtacgccattggtggaagtgcttcccctaccatcaatagccaaggg
aacagataccttgctcccaataaccgagataggaaagaggtcacaaagcgggaggatgca
ccacaaagcaaatggaagaattggaattggaggtcaagtggagatttgatgttgaatgga
gcattcttcacgagatcgggtgctggatcgtcgtctagctacgcgagggcgtcgagcttg
agtgcgaagtcgtcgtcgttggtgagtacgatgacggcgggagcaggggtgctgcggtgc
cgaaaggggtcccggtgttag
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