Cucurbita pepo subsp. pepo (vegetable marrow): 111804996
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Entry
111804996 CDS
T05351
Name
(RefSeq) vacuolar protein sorting-associated protein 32 homolog 2-like
KO
K12194
charged multivesicular body protein 4A/B
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03250
Viral life cycle - HIV-1
cpep03272
Virion - Hepatitis viruses
cpep04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
111804996
03272 Virion - Hepatitis viruses
111804996
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111804996
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpep04131
]
111804996
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpep04147
]
111804996
Membrane trafficking [BR:
cpep04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
111804996
Exosome [BR:
cpep04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111804996
Exosomal proteins of other body fluids (saliva and urine)
111804996
Exosomal proteins of colorectal cancer cells
111804996
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
Ribosomal_S10
MACPF_D2
Motif
Other DBs
NCBI-GeneID:
111804996
NCBI-ProteinID:
XP_023545615
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Position
LG11:9572819..9576361
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AA seq
218 aa
AA seq
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MFNRLFGKPKQEANALATLEKLSETLEMLEKKENVLVKKASAEVEKAKEFTRVKNKRAAI
QCLKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMQKATNID
DVDKTMDEINEQTENMKQIQEALSTPIGAAADFDEDELEAELEELESAELEEQLLQPAST
TPAAPVSVPSGRVPARPVPQKRNAEEDELAALQAEMAL
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaggctttttggtaaacctaaacaagaagccaatgctttggctacgttagag
aagctaagcgagacgcttgaaatgctggagaagaaagagaatgttcttgtaaagaaggca
tctgcagaggttgaaaaagctaaagagttcacaagagtgaagaataaacgagcggccata
caatgtttgaagagaaagagactctacgaacagcaagtagagcagcttggaaattttcaa
ttgcgtatccacgatcagatgattatgttagaaggcgctaaagctacgacggaaactgtc
gatgctttgagaacaggagcatcggcaatgaaggcaatgcagaaagcaacaaatattgat
gatgtggacaaaacgatggatgagattaatgagcagacggagaatatgaaacagatacag
gaagcgctatcaactccaattggtgccgcagctgacttcgacgaggatgaattggaggcg
gaacttgaagagctggaaagtgcggagttggaagagcaacttctccaaccggcgtcaaca
actcctgctgcgcccgtttccgtcccgtcaggccgagtacctgcacgccctgttcctcag
aagagaaatgctgaagaagacgaactcgcagctctgcaagcggagatggccctctaa
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