Cucurbita pepo subsp. pepo (vegetable marrow): 111805001
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Entry
111805001 CDS
T05351
Name
(RefSeq) afadin- and alpha-actinin-binding protein-like
KO
K06085
synovial sarcoma, X breakpoint 2 interacting protein
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
111805001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpep03036
]
111805001
Chromosome and associated proteins [BR:
cpep03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
111805001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ADIP
GIT_CC
Motif
Other DBs
NCBI-GeneID:
111805001
NCBI-ProteinID:
XP_023545625
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Position
LG11:complement(4132230..4140477)
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AA seq
396 aa
AA seq
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MDLSHLIRPSSNSSSSSSFNVPTMAATKTDFDLSPSPQSIYSVGDYTFADVTNLDHCAKY
LNQTLITFGFPASLDLFSNDPVSIARTCNCIYFLLQQRQRDIDFRESANEQRQRLLLDIS
RLETKVERLESVIQAKDREIATITRTEAKAKAAFKAQIDKLQQEKDEFQRMVIGNQQVRT
QQMHEMKKKEKEYIKLQERLNQVLMEKKKESRSGMEIMNLLQKEGRQRGTWNGKKTDNDF
YKKIVDTYEVKNQELMSENADLKALLRSMQVDMRDFLNAPNGLPKQPLAVNERVESEGAR
FSFGGRTDVFDLPFHMARDKIEESLRNKMASIKERMGELQDAQKESEVTSEATEREFELE
AQLVEARSIIQEQASIMSKHAKSERPRSLKGPFDSG
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggatctatcccacctgatccgtccttcttccaactcctcctcctcctcctccttcaac
gttccaacaatggcagcaaccaaaacagactttgatctcagtccatctccgcagtctatc
tactcggtcggtgactatacatttgcggatgtcactaacttggaccattgcgctaagtat
ttgaaccagacgcttatcacatttggatttccggcttcgctcgatcttttctcgaatgat
ccggtgtctatcgcgaggacgtgcaattgtatatatttcctgcttcaacagaggcagcgt
gacattgactttagggaatctgctaatgaacagagacaaagactacttttagacatatca
agattggagactaaagttgagaggctggagtcagtaatacaagctaaagatagggagatt
gcaacaattacacgaacagaagccaaagctaaggcagctttcaaagcccaaattgataag
cttcagcaggaaaaggatgagtttcaaagaatggttattggcaatcagcaagtaagaact
caacaaatgcatgagatgaagaagaaagaaaaggagtatatcaaattgcaggaaaggcta
aaccaagttttaatggagaaaaagaaagaatctagatcaggaatggagataatgaatttg
ctacagaaagaagggcgacaacgtggaacttggaatggcaagaagactgataatgatttc
tataaaaagatagtggatacttatgaagtaaaaaatcaagaattgatgtcggagaatgct
gatttgaaggcattgttgcgatcaatgcaggttgatatgagggatttcctaaatgctcca
aatggactgcctaagcaaccccttgcagttaatgaaagagttgaaagtgaaggtgcacgg
ttttcctttggtgggaggacggatgtttttgaccttccgtttcatatggctagagataag
attgaagagagccttcggaataagatggcttctataaaggagcggatgggtgagctgcaa
gatgctcagaaagaatctgaagttacttctgaagctaccgagagggaatttgagttagaa
gcacaacttgtagaggcaaggagcataatccaggagcaggcatcaattatgtctaaacat
gccaaatctgagaggccaaggagtcttaagggcccttttgattctggctga
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