Cucurbita pepo subsp. pepo (vegetable marrow): 111805057
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Entry
111805057 CDS
T05351
Name
(RefSeq) piRNA biogenesis protein EXD1-like
KO
K18740
exonuclease 3'-5' domain-containing protein 1
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpep03019
]
111805057
Messenger RNA biogenesis [BR:
cpep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
111805057
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
KH_1
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
111805057
NCBI-ProteinID:
XP_023545692
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Position
LG11:475440..481160
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AA seq
340 aa
AA seq
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MANTPPSHQTYIPLPSDSGENQNDPEANKTLVPIHIVTHASQLPNEFVDPSPEKPLVVGF
DCEGVSLCRHGSLCIMQIAFPDAIYLVDAVQGGEELVKVCKPALESTYVTKVIHDCKRDS
EALYFQFGIKLNNVIDTQIAYSLIEEQEGWTKTPDNYISFVGLLADSRYCGVSYVEKEEV
RLLLRQDPKFWTYRPLSELMVRAAADDVRFLLYIYHKLMEKLNHQSLWYLAVRGALYCRC
FCISDNGYADWPPLPSVPDNLVVEGKAPEEEILSVLDIPRGMMGRVIGRRGASILAIKES
CKAEILVGGTKGPPDKVFVIGPVRQVRKAEAMIRGSLLEM
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacactcctccttctcaccagacgtatattcctctgccttcggactcaggtgaa
aatcagaacgatcctgaagccaacaaaaccttggttcctattcatattgttactcatgca
tctcaactccctaacgaatttgttgatccatcacctgaaaagcctctggtagttggcttt
gattgtgaaggtgtcagcctgtgtcgccatggaagtctttgtatcatgcagattgcattt
ccagatgctatatatctggttgatgctgttcagggaggagaggaacttgtgaaagtctgt
aagcctgcccttgagtccacatatgtcacgaaagttattcatgattgtaaacgagatagt
gaggcattgtactttcagtttggtattaagttgaacaacgttattgatacacagattgca
tattcacttatagaggagcaagagggatggacaaagacgccagataactatatctccttt
gttggtcttcttgcagattcacgttattgtggtgtatcatatgtggagaaggaagaggtc
cgcctcctacttaggcaggacccgaagttttggacctatagaccattgtctgaattgatg
gtccgtgcagctgctgatgatgtacgctttctgctttacatctatcacaagttgatggag
aaattgaatcatcaatcgctgtggtacctcgcagtgcgtggtgctttgtactgccggtgt
ttctgcatcagtgataatggatatgctgactggcctcctctcccttctgttccagataac
cttgtagtagagggcaaagctcctgaagaagaaattctttcagtcttagacattccccgt
ggaatgatgggtcgcgtaattggtaggagaggagcctcaattttggcaataaaggaatct
tgcaaggcggaaattctcgttggcggcaccaagggcccaccggacaaggttttcgtcatt
ggacccgtgaggcaggtaaggaaggcagaagctatgatacgaggaagcttgcttgaaatg
tga
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