Cucurbita pepo subsp. pepo (vegetable marrow): 111805181
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Entry
111805181 CDS
T05351
Name
(RefSeq) putative pentatricopeptide repeat-containing protein At3g23330
KO
K23541
Ca2+/H+ antiporter, TMEM165/GDT1 family
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpep04131
]
111805181
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpep02000
]
111805181
Membrane trafficking [BR:
cpep04131
]
Endosome - Golgi transport
Others
Others
111805181
Transporters [BR:
cpep02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
111805181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPR_2
PPR
GDT1
DYW_deaminase
PPR_1
PPR_3
E_motif
Eplus_motif
PPR_long
TPR_30
OFeT_1
Motif
Other DBs
NCBI-GeneID:
111805181
NCBI-ProteinID:
XP_023545881
LinkDB
All DBs
Position
LG11:4686338..4693880
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AA seq
1014 aa
AA seq
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MGLRSNPTGNLSFSPSLILLLLLVSLFASVQVFSAEVEKEELDGPKDLGRRSKISWNNID
TIAARKDVVDSEDLNLDLDSVGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI
VLSGALSALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKS
STKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH
KNALGVAVGAILGHSVCTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPLFL
VALENYHSSNDSLPNTLHAMMVKNGSIFESRKFILSSYVKSEKLNDARKVFDEMPSRDVL
TWTVLISGFARVNCSEMALQLFREMLVEGVCPNPFTLSTVLKLCSRVGDVKMGKGIHGWI
LRSGVNLDVVLENSMLDLYAKFDEFDYVKKLFDSMREKSTATYNILLGVHVRSDVNKSLD
LFRNLPCRDTASWNTVICGLMQGGYLNEALELLYEMVENEPEFNKVTSSIALSVVSSLLI
FELGRQVHGRIVRCGFHNDGFVKSSLINMYIKCGNLEKASVIYSQMPSGFAKKQDFDIVC
SDTMTEIVSRSSMVSGYVRNGKYEDAFKTFVSMVREQVLMDKFTIASVVSACSNAGVFEL
GRQIHAYIQKTGEQLDAHLTSSLIDMYAKGGSLDCARQIFEQTTYLNVVIWTSMITGCAL
HGQGKEAIRLFEKMRYEGMIPNEVTFLGVLAACSHAGLLEDGRLYFNMMKDVYAIKPKVE
HFTCMVDLYGRAGRLNEVKKFIYENDLSHLNAVWKAFLSSCQLYKDIEMGNWVSERLFRL
EPLDEGPYVLLSNMCSSNQKWEEAFRTRRSMQHRGISKTPGQSWIHVKNRVHSFVAGDRS
HPQHAQIYEYLDKLIGRLKEIGYLFDVKLVMQDVEEEQGEVLLGWHSEKLAIAYGLISLG
SSIPIRIMKNLRICTDCHNFMKLTSQLLCREIIARDIHRFHRFNSGHCSCGDYW
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgcgctcaaaccctacgggaaacctctccttttctccttctttgatcctcctt
ctgcttcttgtttctctgtttgcctccgttcaggtgttttctgcggaagtggagaaagag
gagttggatggacctaaagatctcggtcgacgtagcaagatttcctggaacaacattgac
acaattgctgcaagaaaggatgttgttgactcagaagatcttaatcttgacctggactcc
gttggtcttggagtttttgacgcattttttgctagtttgtccatgataattgtcagtgag
attggagatgagacgtttataatagctgcacttatggctatgcgccacccgaagtccatt
gtattatctggtgcgctcagtgccctgattgtaatgacagtactctcgactggattaggt
aggatagtgccgaatttgatatcaaggaaacataccaataatgctgctacagttctgtat
gcattttttggattgcggttactttacattgcttggagatccaaagcagactcaaaatct
tcaacgaaaaaggaaatggaagaagtagaggagaaactcgaggctggacaatccaagacg
acctttcgccgcttctttctccgattttgcacacccatattcttggagtcatttatttta
accttccttgccgaatggggagatcgaagtcagatagctacaattgctctagcaacacac
aagaatgcacttggagtggctgtgggagccatcttggggcattcagtatgcacatcaatg
gcagtgatcggtggaagcatgttggcatcgaagatatcacagggcacagttgcaacagtt
ggaggcttgctcttccttggcttctccttgtcttcctattttttcccacctctattttta
gtagctttggagaactaccactcttcaaatgattctttgcccaatacccttcatgccatg
atggtcaagaatggttctattttcgaatcgaggaagtttattttgagttcttatgtgaaa
tctgagaaattaaacgatgcacggaaagtgttcgatgaaatgcctagcagagatgtactt
acatggacggtccttatatccggttttgctagagtaaattgttctgaaatggcattgcaa
ctgtttagagaaatgctggttgaaggtgtttgtccaaatccttttactttgtctactgtt
cttaaactttgctctagagtgggtgatgtgaaaatgggtaagggaattcatggatggata
ctcagaagtggggttaacttagatgttgtcttggagaattctatgcttgatttgtatgct
aagtttgatgaatttgattatgtcaaaaagttgtttgattcaatgagagaaaagagcact
gctacttacaacatattgcttggtgtgcatgtccgtagtgatgttaacaaatctcttgat
ttattcagaaacttgccttgcagagatactgcaagttggaatacagtaatatgtgggcta
atgcaaggtgggtatctgaatgaagcattggagctactctatgagatggtggagaacgaa
cccgagtttaacaaagttacttcttccatagccttaagtgtcgtttcttctttactgatt
ttcgagctaggtagacaagtacatggtcgaatagtcaggtgtgggtttcataatgatgga
tttgtaaagagttcactgataaatatgtacattaagtgtggaaatttggaaaaagcatcg
gtgatatatagtcaaatgccttcgggttttgcaaaaaaacaagatttcgacattgtatgt
agcgacacgatgacagaaattgtttcacggagctcaatggtgtctggatatgttcgaaat
ggcaagtatgaagatgccttcaaaacctttgtttctatggttcgtgaacaggttttaatg
gataaatttaccattgcaagcgttgtttccgcttgttctaatgctggcgttttcgagctt
ggacgtcaaatccatgcatatattcagaaaacaggggaacagcttgatgctcacttgact
tcctccttgattgacatgtacgctaaaggtgggagtcttgattgtgcccgtcaaattttc
gagcaaacgacttacttaaacgttgtgatatggacttccatgatcactggatgtgctcta
cacgggcaaggtaaggaagccattagactgtttgaaaagatgagatatgagggaatgata
ccaaatgaagttacttttttaggagttttagcagcttgcagtcatgctgggctacttgaa
gatggccgtctatattttaacatgatgaaggatgtttatgcaatcaagcctaaggttgag
catttcacttgtatggtcgatctttacggtcgagctggacgtctgaacgaagtcaagaaa
ttcatctacgagaatgatttatcacaccttaatgcagtttggaaggcattcctgtcatct
tgtcagctttacaaggacatcgaaatggggaattgggtttctgaaagattgtttagactc
gaaccactagacgaagggccttacgttttactatcgaacatgtgctccagcaatcagaaa
tgggaagaagctttcagaacaagaagatctatgcaacacagagggattagcaaaacacct
ggtcaatcttggattcatgtgaaaaatcgagtccattcttttgttgcgggagatcgatcg
caccctcaacacgctcagatatatgaatatctagacaagcttattggaagattgaaggaa
attgggtatttgtttgatgtaaaattggtgatgcaagatgtagaagaagaacagggtgaa
gtgcttcttggttggcatagtgaaaagcttgcaattgcttatggcttaatcagtttgggc
tcttccattccaatccgaatcatgaagaaccttaggatatgtactgattgtcataacttt
atgaagttaacatctcaacttttatgcagggagatcattgcacgagatattcatcgtttc
catcgttttaactcaggtcattgctcgtgtggtgattattggtga
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