Cucurbita pepo subsp. pepo (vegetable marrow): 111805219
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Entry
111805219 CDS
T05351
Name
(RefSeq) paired amphipathic helix protein Sin3-like 3
KO
K11644
paired amphipathic helix protein Sin3a
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpep03036
]
111805219
Chromosome and associated proteins [BR:
cpep03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
111805219
REST complex
111805219
Heterochromatin formation proteins
Other heterochromatin formation proteins
111805219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
Fic-like_C
Motif
Other DBs
NCBI-GeneID:
111805219
NCBI-ProteinID:
XP_023545932
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All DBs
Position
LG11:complement(5669736..5680142)
Genome browser
AA seq
1369 aa
AA seq
DB search
MKRSREDVNMESHLQRPVFPSRGESTVQSQMVGGGSIQKLTTNDALEYLKNVKDIFRDKK
ETYEDFLEVMKEFKAQRIDTAGVIARVKHLFKGHRDLILGFNTFLPKGFAITCSPEDETP
PQKKKPVQFEEAINFVGKIKTRFEGDSHVYKSFLEILNLYRKENKSISEVYREVSALLQD
HPDLLREFVHFLPDASATTSNNHVSSLRNSVLRDRNSSMPPIQQKERTMAPHADHDMGVN
HPDCDHARVTIKGDKDKCQYSEKEKDRRDNTDSREQYRDIDKKFNEHDNSRDISMQSFSL
KKKSTIRVEDTTSEKLRPGGEGMSFIEKIRQKLPNLDVYQEVVKCLDIFDKEIITRSELH
SLVRDLLGRYPDLMDAFGEFMTLCDRTDGLLADIMSKKSLWNEGSLPRLVKVEEKDRNRD
QERGDGVKERDHGNREKDNRLDKSVAFGHNDVGSHKMSLFSGKDKYFAKPINELDLSNCE
RCTPSYRLLPKNYPIPYASQRTEIGDHVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRC
EDDRFELDMLLESVNVTSKRVEDLLEKVNLSDNPVHIEDHLTAALNLRCIERLYGDHGLD
VMDVLRKNAPLSLPVILTRLKQKQEEWARCRSDFNKVWAEIYFKNYQKSLDHRSFYFKQQ
DTKSLSTKALLSEIKEISEKKHKEEDVLLSITAENKRPIIPNLEFDYPDQDIHEDLYHLI
KYSCREICSTDQSDKAMKIWTTFLEPMLGIPSRPLGAEDSKETNRENNFAVRGTAVGMVE
ISSSSNGGGAESKLSDPPRTEVESIPPKQSSPCRVWPTNGDSCPEENSFHKENRVDSKVD
ALCKLQFNNKQENSNERLAKSNALVSSALEQENGKVIVETASGLRSTSSRTWNGSVDKGL
ELASSQGGGSSRPLLSNGVTAEGSNAPSFNEQCDGHSKIEREEGELSPTGELEDNFSNYQ
EASLDKAKDSAKDRQCFRTCADKVSCRGVTGETHIDADDEGEESARRSSEDSKNGSENCD
ISGTESVDGEDSTREGQDDGGHHDRDSKVESEGEAEGMDDAHSAEGDGTALPFSERFLLN
VKPLAKYIPLALRDEKKNSRIFYGNDSLYVLFRLHRTLYERIRSAKINSSSGEKKWRASN
DTSPNDLYSRFMSALRSLLDGSSDNMKFEDDCRSIIGTQSYVLFTLDKLIYKLVKQLQTV
ATDEMDTRLLQLYAYENSRKHGKDVDTVYHDNARVLLHDDNIYRIECSCTPGHLSIQLME
FGHDKPEVTAVSLDPNFSSYLHNDFLSILPDKKEKSGIYLHRNKCKYACRDDISAACQAM
EGLKVVNGLECKITCNSSKVSYVLDTEDYLFRPKVRRRLNRSGSYSRHL
NT seq
4110 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggtccagagaggatgtaaacatggaatcacacctccagcgtccagtatttccc
tctagaggagaatcaactgtgcagagccagatggtgggaggtggcagtattcagaaacta
acaacgaatgatgccctagaatatcttaagaatgtcaaggacatcttccgagacaagaag
gaaacatatgaagattttcttgaagttatgaaagaattcaaggctcaaagaattgatact
gccggtgtcatagcaagagtaaagcatctatttaaaggtcatcgtgacctgattttgggc
tttaatacttttttgcccaaaggatttgcaataacttgttctcctgaggatgaaacacct
cctcaaaagaagaagcctgttcaatttgaagaagctatcaactttgtcggtaagattaag
acacggttcgaaggtgatagccatgtatacaagtcatttttagaaattttgaatttgtac
aggaaggaaaacaaatctataagtgaggtgtaccgggaggtctctgcactgctgcaagac
cacccagatcttctcagggagtttgttcattttctgcctgatgcttcagccacaacctca
aataatcacgtgtcatctctgagaaattctgtgcttcgtgatagaaattcttcaatgcca
cctattcaacaaaaagaaaggacaatggctccacatgctgaccacgacatgggtgttaac
catcctgattgtgaccatgctagagtaactataaaaggtgataaagataaatgtcagtac
agtgaaaaagagaaggacaggagagacaacacagatagtagggaacagtatagggacatt
gataaaaagtttaatgagcatgataacagtagggacatcagcatgcaaagtttttcccta
aagaagaaatctaccattagggttgaagatacaacttcagagaaattgcgtccaggtgga
gaaggtatgtcttttattgagaagataaggcagaagttaccaaatcttgatgtttaccaa
gaagttgtgaagtgccttgatatatttgacaaggaaataatcactcgatcagaactgcat
tctctggtgagagatttgcttggaagatatccagaccttatggatgctttcggtgaattt
atgacactttgtgacagaactgatgggcttctagcagatattatgagtaaaaaatccttg
tggaatgaaggtagtttaccaagattggtgaaggtagaggaaaaggatagaaatcgagat
caggaaaggggggatggtgttaaagaacgagaccatggaaatcgagaaaaggataatagg
cttgataaaagtgttgcttttggccataatgatgttggaagccacaagatgtctctattt
tctggcaaggacaaatattttgcaaagcctatcaatgaacttgacctctctaattgtgag
cggtgtacacccagttaccgtcttcttccgaagaattatccaataccctatgctagccaa
agaacagaaattggtgatcatgttttaaatgatcattgggtttctgtcacttcaggaagt
gaggattactcttttaaacacatgcgcaaaaaccagtatgaagaaagcctctttcgttgt
gaggatgacaggtttgaattggatatgttgttagagtctgttaatgtaacatccaagcgt
gtcgaagacttattagaaaaagtcaacttgtctgacaatccagtccatattgaagatcat
ttaacagcagcacttaatttgaggtgcatcgagcgcttatatggcgatcatggtcttgat
gtgatggatgtgttaaggaagaacgctcctctttctctccctgttatattaacccgtttg
aagcaaaagcaagaagagtgggcacgatgtcgatctgattttaataaagtttgggctgaa
atatattttaagaattatcagaaatcactggatcatcgcagcttctatttcaagcagcag
gatacaaagagcttaagcacgaaagctttgttatcagagatcaaggaaattagtgaaaag
aagcataaggaagaggatgtcctgctctctattactgcagaaaataaacgacctataatc
ccaaatttggaatttgactatcctgatcaggatattcatgaagatctctatcaccttatc
aaatattcctgtagagaaatatgctccacagatcaatccgataaagctatgaagatttgg
acaaccttcctggagcccatgcttggtattccttcacggcccctgggtgctgaggattcc
aaagaaactaatagggaaaataattttgcagttagaggtactgcagttggcatggtagag
atcagcagtagttctaatggtggaggtgctgagtccaagctgtcagatcctcccagaact
gaagtagaaagcattccacctaaacaatcaagcccttgcagggtttggcccacgaatgga
gattcttgtcctgaagagaatagttttcacaaagaaaaccgtgttgacagcaaggttgat
gctctctgtaaattgcagttcaacaacaaacaagagaattctaatgagaggttggcaaaa
tccaatgcgttggttagcagtgcactcgaacaagagaatggaaaagtaattgtagaaact
gcatcagggctgcgttctacttcatccagaacttggaatggtagtgttgataaagggctt
gagttagcatcatcgcagggtggtggttcatcaaggccactgttgtccaatggtgtgacg
gccgaaggctcaaatgctccaagtttcaatgaacaatgtgatggtcactcaaagatagag
agagaagagggcgaattatcaccaaccggagaacttgaggataatttttcaaattatcaa
gaagctagtctcgataaagcaaaagacagtgccaaagacaggcaatgtttcagaacatgt
gcagacaaagtatcttgcaggggtgtgacaggagaaactcatatagatgctgatgacgaa
ggggaggaaagtgctcggcggtcatcagaagacagcaaaaatggttctgagaattgtgat
atttctggaaccgagtctgttgatggagaggacagtactcgtgaagggcaggatgatggg
ggtcatcatgaccgtgatagtaaggttgagagtgaaggtgaggctgaaggaatggacgat
gcccacagtgccgagggtgatggaacagcattacccttttcagaacgttttcttcttaat
gtgaagcctcttgccaagtacatcccattggcattacgggatgaaaaaaagaactcccga
attttttatggaaatgactccctttatgttctttttagacttcaccgaacattgtatgag
cggatacgatcagcaaagattaattcatcatctggtgagaagaagtggagggcttcaaat
gatactagccctaatgatctctactccagatttatgagtgcacttcgtagtttacttgat
ggttcatctgataatatgaagtttgaggacgactgccgatctattattggaacccagtcg
tacgttctattcactttggacaaattgatttataaactcgtcaaacagcttcaaaccgtt
gctactgatgagatggataccaggcttcttcaattatatgcctatgagaattcaagaaaa
catggaaaagatgtagacacagtttatcatgataacgcccgtgtgcttcttcatgatgat
aacatataccgaatcgaatgttcatgcactccaggtcatctatccattcagctaatggaa
tttggccatgataagcccgaagttacggctgtttctctggatcccaatttctcatcttac
ctgcacaatgatttcctttccattctccctgacaaaaaagagaagtccggaatctactta
cacagaaataagtgcaagtatgcctgcagggatgatatctctgctgcatgccaggccatg
gaaggactcaaggttgtcaacggtctggagtgtaaaatcacatgcaattcatcaaaggtc
tcctacgttttagatacagaagactatttgtttcgcccaaaagtcagaagaaggttgaat
agaagtggttcttacagtcgccacctatga
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