Cucurbita pepo subsp. pepo (vegetable marrow): 111805225
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Entry
111805225 CDS
T05351
Name
(RefSeq) LOW QUALITY PROTEIN: protein CHROMATIN REMODELING 19
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpep03036
]
111805225
Chromosome and associated proteins [BR:
cpep03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
111805225
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_34
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
111805225
NCBI-ProteinID:
XP_023545956
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Position
LG01:5177919..5195669
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AA seq
747 aa
AA seq
DB search
MKRVFDEISDDEWSNHSFKPSRVFSKPQTQPPIPPPIESFAYQPPSLYISDDSGDDCVVV
MESSKNFKESLEDDDVEVEGVKSSTVMSRGRRFVVDDEDEESEKELTEVCDVRSTSEEXG
GGGGGGGGRQGDEDDVVGMALRKCAKLSAELKRELYGSSVSACERYSEVESSSVRIVTQD
DINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGGAILADEMGLGKTIQAITYLVML
KYLSNDSGPHLIVCPASVLENWERELKKWCPSFSVLQYHGAARSTYAKKLSSLAKSGLPP
PFNVLLVCYSLFERHSSQQKDERKILKHWQWSCVLMDEAHALKDRNSYRWKNLMSLARNA
KQRLMLTGTPLQNDLHELWSLLEFMMPNLFAAGDVDLKKLLTAENNSLVNHMKFILGPFI
LRRLKSDVMQQLVPKIQQIQFVAMEKQQEDAYKDAIEAYRNASRARIDRKANTNSDNIYG
VLPRRQISNYFVQFRKIANHPLLVRHIYNDEDVVRFAKKLHPLGAFGFECSVERVVEELK
SYNDFSIHRLLLSYGITDRKGVLSDNKVLLSAKCRELAQLLPSLKQGGHRVLIFSQWTSM
LDILEWTLDVIGLTYRRLDGSTQVAERQTIVDTFNNDTSIFACLLSTRAGGQGLNLTGAD
TVVIHDMDFNPQIDRQAEDRCHRIGQTKPVTIYRLVTKGTVDENVYEIAKRKLVLDAAVL
ESGIEMDNERESSEKTMGEILSAILLG
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtgtcttcgacgaaatttcagatgacgagtggtcgaatcactcctttaagccc
tctcgtgtcttcagcaagccgcagactcaacctccgatccctcctccgattgaatctttt
gcataccaaccgccctcgctgtatatttccgatgatagcggtgacgattgtgtcgtagtc
atggaaagttccaagaatttcaaggaaagtttggaggatgacgatgtggaggttgaggga
gtgaagtcctccacggtgatgagtcgtggccgtcgatttgtggtggatgatgaagatgaa
gaaagtgagaaggaattgaccgaggtttgtgatgtaaggtcgacgagtgaggagngagga
ggaggaggaggaggaggaggaggacgacagggagatgaggatgatgttgtcggtatggct
ctgcggaagtgtgcaaaattatctgccgagttgaagagagagctgtacggctcttccgtc
tctgcttgcgaacgatattctgaagtggagtcttcttctgttaggatagttacccaggat
gatattaatgcggcttgcaaggctgaagattctgattttgagcctgttctcaagccatat
cagctggttggcgtgaactttcttcttcttttgtatcgtaagggagttggtggagctata
cttgcggatgagatgggtttggggaagacaattcaggctattacatatcttgtaatgttg
aaatatttgagcaatgattcggggcctcatctaattgtatgccctgcatctgttctggag
aactgggaaagagaactcaaaaagtggtgcccatccttttctgtactccagtatcatggg
gctgcccggtcgacatatgcaaagaaattgagttctctggccaagtcggggttgcctcct
ccatttaatgttcttcttgtttgttattctctttttgaaaggcacagttcccagcagaaa
gatgaacgtaaaattctgaaacactggcaatggagctgcgttcttatggatgaggctcat
gccttgaaagatagaaacagttatcggtggaaaaatttaatgtctcttgcacgtaatgca
aagcaacggttaatgttgacagggacaccgcttcagaatgatttacatgagctgtggtca
ctgttggagtttatgatgcccaatctctttgctgctggggatgtggacttgaaaaaactg
ttaacagctgagaacaattctttggttaaccatatgaaattcattttgggtccgtttatt
ttgaggcggttaaaatctgatgttatgcagcaacttgttccaaagatacagcagattcaa
tttgttgcaatggaaaagcaacaagaagatgcctacaaggatgccattgaagcttatcga
aatgcttcacgtgctcgtattgataggaaagccaatactaattcagataacatatatggt
gttcttccccgtcgtcagatatctaattattttgttcagttccgcaagattgctaatcat
cctttactggtgcggcacatttacaatgatgaggatgttgttcgttttgctaaaaagtta
catcctttgggtgcatttggctttgaatgttccgtggaaagggtagttgaggaacttaaa
agttacaatgatttttccattcaccggttattactttcgtatggcatcactgacagaaag
ggagttctatcagacaacaaagtgctactttcagctaagtgtcgggaattagcgcaacta
cttccttcactgaagcaaggtggacatcgagttcttattttcagtcaatggacatcaatg
ctcgacatcctggaatggacattggatgtgattgggttaacttatagacgacttgatgga
agcacgcaggtagcagaacgacagacaatagttgacactttcaataacgacacttcgata
tttgcatgtttgctttctactagagcggggggacagggcttgaacttaactggagccgat
actgttgtcattcacgacatggatttcaatccacagattgaccgtcaagcagaagatcgt
tgtcatcgaattggccaaaccaaacctgtcactatatacaggttggtcaccaaggggaca
gtggatgaaaatgtctatgagatagcaaaaaggaagttagtccttgatgctgcagttctg
gaatcaggtatcgagatggataacgagcgcgagtcatctgagaagaccatgggggagata
ttatcagcaattcttcttggttag
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