Cucurbita pepo subsp. pepo (vegetable marrow): 111805293
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Entry
111805293 CDS
T05351
Name
(RefSeq) transcription factor PRE6-like
KO
K28364
atypical basic helix-loop-helix transcription factor protein
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpep03000
]
111805293
Transcription factors [BR:
cpep03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
111805293
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_ILI
HLH
SYCE1
CENP-F_leu_zip
PUMA_CC
Ran-binding
DUF948
FAM120A
Pil1
TssR_VWA
Rrn6_HB
Syntaxin_2
DUF2813
KIF21A_4th
FeoB_Cyto
TBCA
Lipase_GDSL
DUF3450
TP_0481_C
Swi5
Motif
Other DBs
NCBI-GeneID:
111805293
NCBI-ProteinID:
XP_023546056
LinkDB
All DBs
Position
LG11
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AA seq
93 aa
AA seq
DB search
MSSRRSSRSRNTSGAQISDDQISDLVSKLQRLIPEIRNTRSHKVSASKVLQETCNYIRNL
HREVDDLSERLSQLLAATENDSAEAAIIRSLFM
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgtctagccgaagatcctcgcgttccagaaacacctcaggggctcaaatctctgacgac
caaatcagtgatcttgtttccaagttgcagcgcctcatccctgagattcgcaatactcgt
tcccataaggtatcggcttcaaaagtgctgcaagaaacatgcaactacataaggaactta
catagggaagtggatgatttaagtgagcgattgtcacagcttttagcagcaacagaaaac
gacagcgctgaggcagcgattattaggagtttattcatgtaa
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