Cucurbita pepo subsp. pepo (vegetable marrow): 111805374
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Entry
111805374 CDS
T05351
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''beta-like
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03015
mRNA surveillance pathway
cpep04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111805374
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
111805374
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cpep01009
]
111805374
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpep03019
]
111805374
03036 Chromosome and associated proteins [BR:
cpep03036
]
111805374
Protein phosphatases and associated proteins [BR:
cpep01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
111805374
Messenger RNA biogenesis [BR:
cpep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
111805374
Chromosome and associated proteins [BR:
cpep03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
111805374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
P2R3B_EF-hand
DUF4187
wHTH-Calcineurin_assc
Motif
Other DBs
NCBI-GeneID:
111805374
NCBI-ProteinID:
XP_023546201
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All DBs
Position
LG11:4758675..4769094
Genome browser
AA seq
539 aa
AA seq
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MNMEISCDVASLDAELLQLAEVSPLAIKSNPDFVEKLFEQWLSLPATNRLVTSLLNDAKA
GVPLNVPGNSSSPHASATNSLPSIFPAGSAPPLSPRSISGSPRVMRPRVGPSILGSPLKV
ISEPIKEPIPQFYFQNGRPPPVDLKEQCMFRTNQAFYGHLDGLQIHEFRAVTKEVCKLPS
FFSTSLFRKIDVNSTGIVTRDAFIEYWINGNMLTLDIATQIFRILKQPDLKYLTQDDFKP
VLRELLATHPGLEFLQSTPEFQERYAETVTYRIYFYINRAGNGQLSLRELKRGNLIDAMQ
HADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIKYGNHALTYRIVDRIF
SQVPRKFTSKVEGRMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGILTRNELQFFY
EEQLHRMECMAQEPVLFEDILCQIIDMIGPENESYITLRDLKGCKLSGSVFNILFNLNKF
MAFETRDPFLIRQERENPTLTEWDRFAHREYIRLSMEEDVEDASNGSAEVWDESLEAPF
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgaatatggaaatctcttgcgatgtggcgtccttggacgctgaattgttgcagctggcg
gaggtctctcctttggcgattaaatccaatcctgattttgtcgagaagctgtttgagcag
tggctttcgcttcctgccactaatcgcctggtcacgtcattgttaaacgatgcaaaggct
ggtgtacccttgaatgtgcctggaaattcttctagtcctcatgcttctgctaccaattca
ctgccttctatatttcctgctggaagtgctcctcctttatcaccgagaagtatatctggt
tcccctcgggtgatgagaccgagggttggtccttctattttaggctccccactgaaagtg
attagtgagccaattaaagaaccaattccgcagttttacttccaaaatggacgtccacca
ccagttgacctgaaagagcaatgcatgttcaggaccaatcaggctttctatggacacttg
gatgggttacagatccatgaatttagggcagttacaaaagaagtatgcaagttgccatca
ttcttttccacttctcttttcagaaagatagatgttaatagcactggcattgtgacaagg
gatgcttttattgagtattggatcaatggaaacatgttgacactggatatagcaacccaa
atttttaggattttaaagcagccggatctcaagtatctgactcaggatgacttcaaacct
gtgcttcgagaactcttagcaacgcacccagggctagaattccttcagagcactccagaa
tttcaggaaagatatgctgaaacagtaacatataggatatatttctacataaatagagct
ggaaatggtcagctttcgcttagggagctcaaacgtggtaatttgattgatgcaatgcaa
catgctgatgaagaagaggacatcaacaaagttttgaggtacttttcttatgagcatttt
tatgtaatatactgcaaattttgggagctggacacggaccacgacttcttgattgacaag
gagaaccttatcaaatatggaaatcatgcgcttacctaccgtattgttgatagaatattc
tctcaggttccaagaaagtttactagtaaagttgaaggtaggatgggatacgaagatttt
gtttattttatattgtctgaggaagataaatcatctgagcctagccttgagtattggttc
aagtgcatagatttggatggtaatggaattttaacacggaatgaattgcaattcttttat
gaggagcaattacatcgtatggaatgcatggctcaagaacctgtgctttttgaggatatt
ttgtgccagataattgatatgattggacctgagaatgaaagttatatcactctacgggat
ctgaaaggctgcaagctttctggaagtgtttttaatattctttttaatctgaataagttt
atggcctttgaaacacgtgatccatttcttatccgccaggagcgcgagaatcctactttg
acagaatgggatcgttttgcgcatagagaatatattaggctttcaatggaagaagatgtg
gaagatgcctctaatggaagtgcagaagtttgggatgagtctcttgaagctccattctga
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