KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111805478
Entry
111805478         CDS       T05351                                 
Name
(RefSeq) protein decapping 5-like
  KO
K18749  protein LSM14
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpep03019]
    111805478
Messenger RNA biogenesis [BR:cpep03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     111805478
SSDB
Motif
Pfam: LSM14 FDF SM-ATX
Other DBs
NCBI-GeneID: 111805478
NCBI-ProteinID: XP_023546355
LinkDB
Position
LG01:complement(8244494..8250633)
AA seq 593 aa
MASDGGSRSSSPADSYIGSLISLTSRSEIRYEGVLYSINTEESSIGLRNVRSFGTEGRKQ
EGPQVPPSDKVFEFILFRGSDIKDLQVKSSPPVQTTPLINNDPAIIQSHYPRPVSTSSSS
LPAVSGPLPDINSQAIPVGIPGSNFHGGLPLYQPGGNVGSWGASPSPPPPNPSDGGLALP
MYWQGYYGPPNGLPHMHQQSLFRPPPGLSLPSSLQPPLQYPNLNASLPSGASNLLEVPSS
LFSANPTTPSLSSTTMPPVTVSSTLPSVLSVPQASEISSSSMASQKVHSALPQVPLSSNL
PLLSPLTASSDVSLVVPPTSNKTTTVSGPALSYQTISQSTSTVVGTSISVLTSAPAPTLV
TPGQLLQTTVVSSSLQTVPKDVEVVQTSSSLAAEQTVPVSADTQPPLLPLPVSPRAIHKP
NDSTPQTRHIYQGRGRGGRFGNSHQTERFTEDFDFMAMNEKFNKDEVWGHLGKNTKSHPK
FNDGDEKFSDEDDAYEEDDGESSKSEMKPVYNKDDFFDTLSCNALDHEAQNGRRPRYFEQ
RKLDTETFGEFARFRGGRGGFHSGRGGRRGGYYGRGYGHVGRGRGRGMHNYNQ
NT seq 1782 nt   +upstreamnt  +downstreamnt
atggcttccgatggtggttccagatccagttcaccggccgattcgtatataggaagcttg
ataagcttaacctccaggagtgagattagatacgaaggtgttctttatagcatcaacact
gaagaatccagtatcggactgagaaatgtacgttcatttggaacagaagggagaaagcag
gaggggccacaagtcccaccaagcgacaaagtttttgaattcatcttgttccgtggaagt
gatatcaaggatctacaggtaaaatcttctccacctgttcagactacacccttgataaac
aacgatccagctattattcagtctcactatcctcgtccagtatctacttcttcaagctcg
cttcctgctgttagtgggcccttgcctgatattaattctcaggccatacctgtgggaatt
cctggatctaatttccatggtgggttgcctttatatcaacctggaggaaatgtagggtct
tggggagcttccccttcgccacctcctccaaatccaagtgatggtggacttgctttgcca
atgtactggcaagggtattatgggccccctaatggacttcctcacatgcatcagcaatca
ttatttcgtccaccacctggcctgtcattgccttcttccttgcagccgccactgcaatat
cctaatcttaatgcttctttaccctccggcgcatcaaatctattagaagttccatcttct
ttattctctgctaatcctaccactcctagtttatcatccacaacaatgccaccagtaact
gtatcttcaacacttccatctgtgctgtcagttccacaggcctctgagatatcatcaagc
tcaatggccagccagaaagtacattctgctcttcctcaagttcctctaagttccaacttg
ccattgctctctcctttgacagcaagttcggatgttagccttgttgtgcctccaacttct
aacaaaactactacagtttctggtccagcattgtcttatcaaactatctctcaatctaca
tccactgttgttggaacatcgatttctgttctgacaagtgcgcctgcacctacccttgtg
actccaggtcagctcttgcaaactacagtagtctcttcatctttgcagacagttccaaag
gacgtggaagtggttcaaacatcttcctcattagcagctgaacaaactgttccagtttca
gcggatactcagccaccattattaccgttaccagtgtctccacgagccattcataagcca
aatgattcaactccacaaacacggcacatctaccagggacgtggtagaggaggacgattt
gggaactcgcatcaaacagaaagattcacggaagattttgacttcatggcaatgaatgag
aaatttaacaaggatgaagtctggggtcatcttggcaagaataccaaatctcatccgaag
ttcaatgatggggatgaaaaattcagtgatgaagacgatgcctatgaagaagatgatggt
gaatcgtcaaagtcagagatgaagcctgtgtacaataaggacgacttttttgatactctc
tcatgcaacgctcttgaccacgaagctcaaaatggaaggaggcccagatacttcgaacaa
aggaagttggacactgagacattcggcgagtttgcaagattccgaggtggtcgtggtggt
tttcattctggacgtggtggccgtcgtggtggttattacgggaggggatatggccatgtt
ggaaggggtcgagggcggggcatgcataactataaccagtag

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