Cucurbita pepo subsp. pepo (vegetable marrow): 111805567
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Entry
111805567 CDS
T05351
Name
(RefSeq) chloride channel protein CLC-c-like
KO
K05016
chloride channel 7
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cpep01009
]
111805567
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpep04131
]
111805567
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpep04040
]
111805567
Protein phosphatases and associated proteins [BR:
cpep01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111805567
Membrane trafficking [BR:
cpep04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
111805567
Ion channels [BR:
cpep04040
]
Chloride channels
Chloride channel (CLC)
111805567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
TAT_signal
Motif
Other DBs
NCBI-GeneID:
111805567
NCBI-ProteinID:
XP_023546452
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All DBs
Position
LG01:complement(4797319..4805198)
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AA seq
775 aa
AA seq
DB search
MDESSENAREIDGSERQVESLFSQDRDSISMTLGEPLLRSSTARISTTSQLAIVGSNICP
IESLDYEIIENDLFMQDWRSRRKIEIFQYVILKWALCLLIGLVTGLVGFFNNIAVENIAG
RKLLLTNNLMLQEKYYLAFAVYVGSNIVLAFSAAALCAYIAPAAAGSGIPEVKAYLNGID
AYSILAPSTLFVKIFGSIFAVAGGFVVGKEGPMVHTGACIASLLGQGGSRKYRLTWKWLR
YFKNDRDRRDLITCGAAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAVV
LRGFMEFCRGGQCGLFGEGGLIMFNIHTENSTYGTPDLIAIVLLGVIGGVFGSLYNYLVD
KVLRTYSIINERGPGSKVILVVSISLLTTCISFGLPWLSQCLPCPPNLEDECPTVGRSGN
YKNFQCPPGQYNDLASLFFNTNDDVIRNLFTSATDKQFQLSSLFIFFTSIYFLGIITYGI
AVPSGLFIPVILAGASYGRIVGRLFGSVATLDVSLYALLGAASFLGGTMRMTVSLCVILL
ELTNNLLMLPLLMLVLLISKSVADIFNKGVYDQIVKMKGLPFMEAHAEPFMRQLVAGGVA
SGPLITFSGIEKVDNIMHALKMTNHNGFPVIDEPPFSDSSELCGLVLRSHLLVLLKEKKF
TKKKTSIRSEILRSFKAYDFAKPGSGKGVKLEDLDINEEEMEMFVDLHPITNTSPYTVVE
TMSLAKAAILFHALGLRHLLVVPKTPGRPPIAGILTRHDFMPEYILGLYPYLNPH
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggacgagagttcagagaacgcccgcgaaattgatggctctgagaggcaggtggaatcg
ctgttctcacaggatcgagattctatatcgatgacgctaggggagccactattgcgttcc
agtactgctaggatcagcaccacctctcagctcgccattgttggttccaatatctgtccg
attgagagtcttgactatgagattattgagaatgaccttttcatgcaagactggaggtcc
agaagaaagatcgagatatttcagtatgttatcctcaaatgggcactgtgccttcttatt
ggtttggttacaggactcgttggcttcttcaacaacatagctgttgagaatattgctggt
cgtaaacttctgctgacgaacaatctcatgctccaggaaaagtactatctggcttttgca
gtatatgtgggttccaatattgttttagccttttctgctgccgcactctgtgcctatatt
gctcctgctgctgcaggttctggcatacctgaggtgaaagcatacctcaatggtatagat
gcttattctatattggctccaagtaccttatttgtgaagatttttggctctatatttgct
gttgccggtggatttgttgtgggtaaggaagggcccatggttcatactggtgcgtgcatt
gcctcattactgggacaaggaggctctcgcaaataccgcttgacctggaagtggctgaga
tacttcaaaaatgatagggacaggcgggatttgatcacgtgtggtgcagcagctggtgtg
gcagctgcctttcgagctccagttggtggcgttctctttgcacttgaagaagcagcttca
tggtggaggagtgctcttctctggaggacctttttcactactgctgtagtagccgttgtc
ttgaggggtttcatggaattttgccgaggggggcaatgtgggttatttggtgaaggaggt
ctcatcatgtttaacattcatacagaaaactccacttatggcactccagatcttattgca
attgttttacttggagttattggtggtgtgtttggaagcctttacaactacctcgtggat
aaggtccttcgaacctacagcatcataaatgagagaggtcctggatcgaaagtcattctt
gttgttagcatttcccttttgacaacatgtatctcatttggtcttccttggctctcacaa
tgtttaccttgcccacctaacttggaagacgaatgcccaaccgttggtcgctcaggaaac
tacaagaatttccaatgcccgcctggccaatataatgatcttgcatcgctatttttcaat
accaatgatgatgtcatccgcaacctgttcacatctgctactgacaagcaatttcagctc
tcctcacttttcatcttctttacttctatctattttcttggcattattacttatggcatt
gccgtgccctcggggctcttcattcctgtaatactggcaggggcctcttatggtcgcatt
gtagggagattatttggttcagttgccactcttgatgtcagtctctatgcccttctcgga
gctgcatccttccttggtggcactatgagaatgactgtttctctatgtgtcatactcctt
gagcttactaataaccttttgatgctcccattacttatgttggttcttctaatttcaaag
tcagtggcagatatttttaataaaggtgtctatgatcagattgtgaagatgaagggacta
ccttttatggaagcccatgcagaaccatttatgaggcaattggtcgctggtggtgtggct
tctggtcccttaattacgttctctgggattgagaaggtcgataacattatgcatgctttg
aaaatgacgaaccacaatgggtttcctgtaattgatgagccacctttctcagatagttca
gagctttgtgggcttgttttgaggtctcatctacttgttttgcttaaagagaaaaaattt
acaaagaaaaagacgtcaattagatcagaaattttgaggagcttcaaagcatatgatttt
gctaaacctggttctggcaaaggagtgaaactggaagatttggacatcaacgaggaggag
atggaaatgtttgttgatcttcatcccatcacaaatacgtcgccttacacagtggtagaa
acaatgtctctggctaaagcagcgattctctttcacgctcttggcttgaggcacttactg
gtggttccgaagacacccgggaggcctcctattgctggaattcttacaaggcacgatttc
atgccggaatatattctgggactttacccgtatctcaaccctcattag
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