Cucurbita pepo subsp. pepo (vegetable marrow): 111805635
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Entry
111805635 CDS
T05351
Name
(RefSeq) far upstream element-binding protein 1
KO
K13210
far upstream element-binding protein
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpep03019
]
111805635
03041 Spliceosome [BR:
cpep03041
]
111805635
Messenger RNA biogenesis [BR:
cpep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
111805635
Spliceosome [BR:
cpep03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
111805635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
111805635
NCBI-ProteinID:
XP_023546546
LinkDB
All DBs
Position
LG11:436473..442511
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AA seq
689 aa
AA seq
DB search
MADEAQYSSGTDTTSNKRKYEDQPPPLVTRRPTGFSGPITSPSSDSAHPPPPSYNNVPPP
MDEIQLAKQRAQEIASRLIISSGGVGAGAGPGVGADVKRPRVENGSGFDSYDKGFSSGAD
LKPHMSSSAPSSIPVSYGFQGTSKKIEIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRD
MDADPNSATRMVELMGTPDQIAKAEQLMNDVLSEAESGGSGIVSRRLTGPSGSEQFVMKI
PNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQL
VNEVISENRVRNSGMSGGYNQQGYQARPPSSWGPPGAPPMQQPGYGYGQQGGYSAPSSQY
NMPQPPYQGYSQPSTGGYASNWDQSTVPTNQPATQGSGYDYYSQQPAQQQQTSGGPGAAA
DNSGYSYGQPQASTYSQQGYSQDGYGGNYHAPQSGYSQPTYDQQGYSSAANYGSVANAGQ
DGLNSYGSQGDSSQTVPPAQSSSVSQQGYGANQQPVPAPNQSGYGMTAPSQTGYGNQPAA
QTGYGAGYGPPQTQKQPANPPAYGQSTQSPSAPSGYGQPAALPSGYSTSQPPTSGYTQSD
SASQRAPPSGYGTAAQPGFAPPPYGVPPTNQAGYGQAPPSYSSSYGAGYPQPPYSSEGNA
GGATRGGYDSASAAQTAPQSGVAKASPKS
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgaagcgcagtattcatctggtaccgatactacatccaacaagcgcaagtac
gaggaccaacctccaccgttggtcacccgccggccgactggtttttccggccccatcact
tctccctcttccgattcggcacatcctccgcctccgtcgtacaacaacgttccgcccccg
atggatgagatccagctcgctaagcagcgtgctcaggagattgcctctcggttgattatc
tccagcggtggggttggggccggtgctggacctggcgttggggctgatgtcaagcgtccg
agagttgagaacgggagcgggtttgattcctacgacaagggttttagttctggtgcagac
ctgaagcctcacatgtcaagttcagccccatcatctatacctgtttcctatggtttccaa
gggacaagcaaaaaaattgagattcctaatggtagagtcggcgtaattattggtaaaggt
ggtgagaccatcaagtaccttcagctccagtctggtgcaaaaatacaagttactcgagac
atggatgcagatcccaattctgctacccggatggttgagctaatgggtacccctgatcaa
attgctaaggccgagcagctgatgaatgatgttctttctgaggctgaatctggaggttct
ggcatagtatcgcggagattaacaggtccatcaggatctgagcagtttgtcatgaaaatt
cctaacaataaggttggcttggttattggtaaaggcggtgaaacaatcaaaagtatgcaa
gctaggactggagcacgtattcaggtgataccattgcacttacccccgggggatacatct
acagaaagaaccttacagattgatggatcaagcgaacagattgagtcagcaaaacagttg
gttaatgaagttatcagcgagaatcgtgtgagaaattcaggtatgtcgggagggtataac
caacaaggttatcaagctcgccccccttcaagttgggggcctcctggggctccaccaatg
cagcaacctggttatggctatggacaacaaggtggatactctgctccttcgtctcagtat
aacatgccacaacctccttatcagggttattcccaaccgtcaactggtggatatgcttct
aactgggaccagtctaccgttccaacaaatcaacctgctactcagggaagtggttatgat
tactacagtcaacagcccgctcagcaacagcagacatctggaggtcctggtgctgcagca
gacaacagtggttacagttatggtcaaccacaagcctctacttatagtcaacaaggatat
tctcaagatggctatggtggtaattaccatgcacctcagtcgggttacagccagcccaca
tatgatcagcaaggttatagttctgctgcaaactatggtagtgtggctaatgcaggccaa
gatgggctcaattcatatgggtcacagggggattcatcacagacggtccctcctgcacaa
tcctcttctgtgagccagcaaggttatggtgcaaatcagcagcctgtccctgcaccaaat
cagtcagggtacggaatgaccgcaccttcccaaactggctatggaaatcaaccagctgct
cagactgggtatggggctggttatggacctcctcagactcagaaacagcctgcaaatcct
cctgcctatggtcagagcacccagtcaccgagcgcacccagtggctatgggcaacctgct
gcattgccgtctggatattccacttctcagcctcccacatctgggtacactcaatcagat
tctgcttctcagcgtgctccaccatccggttatggtactgctgctcagccagggtttgca
ccaccaccttatggtgttcctccaacaaatcaggcaggttacggacaagctccaccgtct
tatagctcctcttatggtgctggttaccctcagcctccatattcttctgaaggaaatgct
ggtggggctactcgtgggggctatgactctgcatcggctgctcagacagcgcctcaaagt
ggggttgcaaaagcatcgccaaaaagttaa
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