Cucurbita pepo subsp. pepo (vegetable marrow): 111805703
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Entry
111805703 CDS
T05351
Name
(RefSeq) nuclear poly(A) polymerase 4-like isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111805703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpep03019
]
111805703
Enzymes [BR:
cpep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
111805703
Messenger RNA biogenesis [BR:
cpep03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
111805703
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Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Polbeta
Motif
Other DBs
NCBI-GeneID:
111805703
NCBI-ProteinID:
XP_023546653
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Position
LG11
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AA seq
761 aa
AA seq
DB search
MVGSDSSTAFHPAPQPASIYGVTKPISLAGPTDADIQRNIELEKFLIDSGLYESKEEAAK
REEVLGRIDQIVKNWVKQLTLLRGYTEQMVEDANAVIFTFGSYRLGVHGPGSDIDTLCVG
PSYVNREDFFIILHNILAEMEEVTDLQPVPDAHVPVMRFKFMGISIDLLYASISVRVVPE
ELNISHGSVLCNVDEQTVRSLNGCRVADQILRLVPNVEHFRTTLRCLKFWAKRRGVYSNV
TGFLGGVNWALLVAQVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPVW
DPRKNPRDRFHLMPIITPAYPCMNSSYNVSTSTLRVMMEQFRCGNNICEEIDMSKAQWSA
LFEPYLFFEIYKNYLQVDIIAADADDLLAWKGWVESRFRQLTLKIERDTRGMLQCHPYPI
EYSDTSKPCSHCAFFMGLQRKEGLRGQGGQQFDIRGTVDEFRQEINMYAFWKPGMDIHVS
HVRRKQLPTFVFPDGHKRAKPVKHEGQQADPVCADMLQDQSGITEKGKKRKSDHEETEME
KKQAFASQPAEESPMLETNGGGSDGKFPSLKSANADCYSEVWPSFEQPDSRMDTDGNGMD
IPTLTKETGPTMDQAELAKVMEGSSSRKEVSDLYKGGLSKPEEALQIEMNQEKIEGFASN
MSGGSAQTVAIRNFLHWTKDVVRIDSESANTFGQTTGEDSTQVDFQPNCNAHNLSCKGND
SRTDPELALENGSVVTGRVFQNGQSKELEPKFSDQAVPEWS
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atggtgggttcagacagttcaactgcttttcacccggcacctcagccggcgagtatttat
ggtgttacgaaaccgatttctcttgctggaccgacggatgctgatattcagcgcaatatc
gaactggagaagttcttgattgactcggggctttacgaaagtaaagaagaagctgcgaaa
agagaagaggttttgggccgcattgaccagattgttaaaaattgggtcaagcaattaact
ctcctaagaggatatacagagcagatggtggaggatgcaaatgctgtaatttttactttt
gggtcttatcgtcttggggtacatggaccaggaagtgacatagacacattgtgtgttgga
ccgtcttacgtgaatagagaagacttcttcatcatcttgcataatattttggctgaaatg
gaagaggttaccgatcttcaaccggttcccgatgctcatgttccagtaatgagattcaaa
tttatggggatatcaattgatcttctgtatgcgagcatttccgtacgggttgttcctgaa
gagctgaacatctctcatggatctgtgctgtgcaatgttgatgaacaaactgttcgaagt
cttaatggatgccgagttgcagatcaaattctaagacttgttccaaacgttgagcacttt
cgcacgacactcagatgtttaaagttttgggccaaaagacggggtgtatactccaatgtc
actgggttccttggaggtgtaaattgggcacttttggttgctcaggtatgccagctttac
cccaatgcaattccaagcatgctagtttctcgtttcttcagagtgtacacccagtggcgt
tggccaaatcctgtaatgctatgttcaatagaagagaatgaacttggatttcctgtttgg
gatcctcgtaaaaatccgcgtgatcgatttcatcttatgccaataataactcctgcttac
ccttgcatgaactctagctataatgtctcaactagtactctccgtgttatgatggaacag
ttccgctgtggtaataatatctgtgaggagatcgacatgagcaaagcccagtggagtgct
ttatttgagccatatttatttttcgagatatacaaaaactatctacaggtggacataatt
gcagcagatgctgatgatttgctagcttggaaaggatgggtagaatctcgctttagacag
cttaccttgaagatagagagagacaccagggggatgctgcagtgccatccctatcctatt
gagtattctgacacgtccaagccatgttctcactgtgcttttttcatgggcttgcagaga
aaagagggattaagaggccaaggaggccagcagtttgacatacgaggaacagttgatgag
ttcaggcaagagataaacatgtatgctttttggaagccagggatggatatccatgtttct
catgtgcggaggaagcaactgcccacctttgtttttcctgatggacacaaacgggcaaag
ccagtcaagcatgaagggcagcaagcagacccagtttgtgctgacatgctccaagatcag
tctgggatcactgagaaagggaaaaaaaggaaaagtgaccatgaagaaacagagatggaa
aagaaacaagcctttgccagtcaaccagcagaagaatctcccatgcttgaaactaatggt
ggtggatcagatgggaaatttccgagtttgaaatctgcaaatgcagattgttactctgag
gtttggccatcttttgaacagcctgatagcagaatggatactgatggaaatggcatggat
attccaactttgaccaaggagactggtcctacgatggatcaggcagagctagctaaagta
atggaaggatcttcctcaaggaaggaggtgtctgatctatataaaggcggtctttcaaaa
cccgaggaagctttacaaattgagatgaaccaggaaaaaattgagggattcgcatctaat
atgagtggtggaagtgcacagacagtagccatcaggaatttcctccattggacaaaggat
gttgtgaggattgactctgagtcagcaaatacatttggtcaaacgaccggggaagatagt
acccaagttgactttcaaccaaattgcaatgcacataaccttagttgcaagggcaatgat
agcaggacggatccagagttggcgttggaaaatggttccgttgtgactggaagagtgttt
caaaatggtcaatctaaagagttggagccgaagttcagcgatcaggcagtcccagaatgg
agctaa
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