Cucurbita pepo subsp. pepo (vegetable marrow): 111805743
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Entry
111805743 CDS
T05351
Name
(RefSeq) vacuolar protein sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111805743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpep04131
]
111805743
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpep04147
]
111805743
Membrane trafficking [BR:
cpep04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
111805743
Exosome [BR:
cpep04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111805743
Exosomal proteins of colorectal cancer cells
111805743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
PH_TFIIH
GRAM
FNIII-A_GpJ
bPH_3
HTH_10
Motif
Other DBs
NCBI-GeneID:
111805743
NCBI-ProteinID:
XP_023546727
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All DBs
Position
LG11:complement(2300501..2306153)
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AA seq
441 aa
AA seq
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MADLFPPAAELTASGRPVLLPSEIECSILSAVDLECDEIPSFPLLKSGIIILTTHRIVWI
SDSTNSSNSAVAVPLAAVNHIFSSKKSIKSMFSSPRVRFQVSFRSGGGLRSAVVTIVIRG
KGDHEVFVSKFWENWRAKAWENDDNNNTKGSSSSSASGPSSTGSGGFYSSEGTVRMVGVS
GILRKEQEMWENTDKSLQEAFQDLNALMSKAKEMVTLAEKMRQKLLSSHSGATNDDEVAS
KEEIQDWLLSVGIISPVTKESAGALYHQQLSRQLADFVRTPLDIAGGMISVIDIYCLFNR
ARGTELISPDDLLLACSLWEKIDVPVMLRKFDSGVMVIQSKSYSDDEVLARIRTLVSKPD
ALQFGISASDAARTLGIAPAMAKEHLLTAESKGVLCRDVSPEGFRFYINLFPEINSEDLY
LVKNYTIYATWIKAVTANRPR
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggccgacctcttcccgccggcggccgaactcactgccagcggccgtccggtgctgctc
ccaagtgaaatcgaatgttcaatcctctccgccgtagacctcgagtgcgatgaaattccg
tccttccctctcctgaagtctggcattatcatcctcaccactcaccgtatcgtctggatt
tctgactcgaccaattcctccaattccgctgttgcggtgcctctcgccgccgtcaaccat
atcttttcgtccaagaagagcatcaagtcaatgttctcctcacccagggtccgtttccag
gtatcgtttcgctctggcgggggtttgagatcggctgtggtcacgattgtaattagggga
aagggggatcacgaggtctttgtgagcaagttttgggagaattggcgagctaaggcgtgg
gagaatgatgataataataatactaaaggttccagcagcagttctgcgtccgggccgagt
tctacgggttctggtggattctattcgagtgaaggaacagtgaggatggttggagtgtcg
ggaattttgaggaaggagcaagagatgtgggagaatactgataagagcttacaagaagct
ttccaggatctaaatgctttaatgagtaaagctaaagaaatggtaacgttagcagagaag
atgagacaaaaacttttatccagtcacagtggtgctacaaacgatgatgaagttgcttca
aaagaagaaatacaggattggttgttgagcgttggtatcatttcccctgtgacgaaagag
tctgctggcgctctttatcatcaacagttgtctcgacagctggcagattttgttcgaact
ccacttgatatagccggtggaatgatcagtgttatagatatatactgtctattcaatcgt
gctcgaggaacagaattgatctcaccagacgatttgctgctagcatgttctctttgggag
aagattgatgttccagtaatgctccggaaatttgacagtggagtcatggtaatccagagt
aaatcctacagtgatgatgaggttcttgctagaataagaactttagtatcaaaacctgat
gctctccaattcggtattagcgctagtgatgctgcaaggactcttgggattgccccagct
atggccaaggagcatcttctaacggcagagagcaaaggcgtcctatgcagagatgtcagc
cctgaggggttccggttttatattaacttatttcctgagatcaactcagaagatttatat
ttggttaaaaattatacaatttatgccacatggatcaaggctgtcaccgctaataggccg
agataa
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