KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111805812
Entry
111805812         CDS       T05351                                 
Name
(RefSeq) UBP1-associated protein 2B-like isoform X1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111805812
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpep03019]
    111805812
   03041 Spliceosome [BR:cpep03041]
    111805812
Messenger RNA biogenesis [BR:cpep03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     111805812
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     111805812
Spliceosome [BR:cpep03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    111805812
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 111805812
NCBI-ProteinID: XP_023546817
LinkDB
Position
LG01:complement(4201664..4208123)
AA seq 411 aa
MEGTSKTTKRKLVKKSDNKVDKKLKKELDDPVSSQPHDDASDSDLDDLPKLLEPFSKTQL
IELICTTALKDANLEAQIRAAADRDVTHRKIFVHGLGWDTTKETLTSVFESFGEIEDCNV
VLDKNTGKAKGYGFILFKSRQGATKALKEPRKKINNRMASCQLASVGSVPPPQSQEVGPR
KIYVANVHHNVDAERLRTFFAKFGELEMGPIGFDPETGKSRGYAIFIYRTNEGARRALEE
PHKVFEGNKLHCQRAAEGKNKNQNSTQAVQSLAQTQPPMMAAMATASNLPLFAQHPSLNP
VCGGFGNPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSMLG
SYGSDSSSLKGLPHIYSSTMLGKAVSDRGPAASGGSLGGYTSYLCFSVGNK
NT seq 1236 nt   +upstreamnt  +downstreamnt
atggagggaaccagcaaaaccaccaaaagaaagctggtcaagaaatctgacaacaaggtc
gataagaaactcaagaaggagcttgatgatcccgtttcctctcagccacatgacgatgcc
tccgactccgatttggacgatcttcccaaactcctcgagcccttctccaagacacaacta
atcgagctcatctgcaccactgctctcaaagatgctaatctcgaagcccaaattcgagct
gctgccgaccgtgatgtcacgcaccgcaagattttcgtccatggcctcggttgggacacc
accaaagaaaccctaacttcggtttttgaatcatttggtgaaattgaagactgcaatgtg
gttttggataagaatacagggaaagctaagggctatgggtttattttgttcaaatcccgt
cagggtgcgactaaggcgttgaaggaacctaggaagaagattaataacaggatggcttcg
tgtcaattggcttctgtgggttcagtgccgccgcctcaaagtcaggaggttgggccgcgg
aagatttatgtggcgaatgtgcaccataacgtggatgctgagaggcttaggacgttcttt
gcgaagtttggggaattggagatgggtccgattgggttcgatcccgaaacagggaaatcg
aggggttatgctatttttatttacagaacaaatgaaggtgcgaggagggctcttgaggag
ccacacaaagtattcgaagggaacaaattgcattgccagagggcggctgaggggaagaac
aagaatcagaattcgacgcaggcagtgcaaagcttggcgcagactcagccgccgatgatg
gcagccatggctacagcttcaaatttgccattgtttgctcaacatccgagcctcaatcct
gtgtgcggtggatttgggaacccagctttgggaggtggaatgttaaaccagggagtagtt
cccatgagtcaagtgggtctggttggtagttcagttggggctgggataggcttgagtggt
tacagtgggggttcatatggcttaagccaattaagtgccggtggttcgtcaatgctaggc
tcttacgggtccgattcttcatcactgaaggggttgccgcacatttattcgagcacaatg
cttggcaaggccgtatcggatcggggtccggcggcttctggtgggtctctcggaggatac
acatcatatttatgtttttcagttggtaacaagtga

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