Cucurbita pepo subsp. pepo (vegetable marrow): 111805814
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Entry
111805814 CDS
T05351
Name
(RefSeq) lysine--tRNA ligase, cytoplasmic-like
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
111805814
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cpep01007
]
111805814
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpep03016
]
111805814
Enzymes [BR:
cpep01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
111805814
Amino acid related enzymes [BR:
cpep01007
]
Aminoacyl-tRNA synthetase
Class II (A)
111805814
Transfer RNA biogenesis [BR:
cpep03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
111805814
Prokaryotic type
Other AARSs
111805814
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
111805814
NCBI-ProteinID:
XP_023546816
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Position
LG11:complement(4083117..4090510)
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AA seq
625 aa
AA seq
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MADSVDGAAKAVSELALGSASAALDMADSAPSAEETISKNARKKELKMKQKEEERRRKEE
LKEKAKQEASQNKKSVAVDDEEMDPTQYFENRLKYLASQKADGENPYPHKFQVSMSLLEY
IEKYGSLNNGDHLEEVMVSLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMVDARNSELDEA
EFARFHGAVKRGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPRQKAAQGSENANL
KKNDAWVPGCTRNPETYILKDQETRYRQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLDDL
DFLEVETPMMNMIAGGAAARPFVTFHNDLNMKLFMRIAPELYLKELVVGGLDRVYEIGKQ
FRNEGIDLTHNPEFTTCEFYMAFADYNDLMELTEKMLSGMVKELTGGYKVKYHSNGLDND
PIEIDFTPPFRRIDMIEELEKMANLDIPKDLSSDEANKYLRAACQKFEIKCPPPETTARL
LDKLVGHFLEETCVNPAFIINHPEIMSPLAKWHRARPSLTERFELFINKHEVCNAYTELN
DPVVQRQRFAEQLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGMGIDRLAMLLTDSQN
IKEVLLFPAMKPQDEPPAPKASTGV
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggcggattctgtagacggagctgcgaaggctgtctctgaattagcattgggttccgct
tctgcggctttagacatggccgactctgctccaagtgctgaagaaactataagcaagaat
gcacgcaagaaggaattaaagatgaagcagaaggaagaggaaaggaggcgtaaggaggaa
ttgaaggagaaagcaaagcaggaagcatcccagaataagaaatctgtagcggtagatgat
gaagaaatggaccccacgcaatattttgaaaataggctgaaatatcttgcatctcagaag
gcagatggtgaaaacccatatcctcacaagtttcaggtttcaatgtctctccttgagtat
attgagaaatatggaagtttaaacaatggtgatcatcttgaggaagtcatggtttctctt
gccgggagaataatgagcaaaaggtcgtcctcctcgaagttgttattttatgatctccat
ggttctggagctaaaatccaagttatggtggatgcacgtaactcagagctagatgaagct
gagtttgcaaggtttcatggcgctgtcaagcgtggcgatattgttggtgtcactgggttt
ccaggaaaaacaaagaggggagagctcagtatttttccaaaatcatttattgtcctttct
cactgtctgcatatgatgccaaggcagaaggcggcccaagggtctgagaatgcaaatttg
aagaaaaatgacgcatgggtcccaggttgtaccaggaatcctgaaacctatattttaaaa
gaccaggaaactcgttatcgtcaacgatatctggatttgatgttaaatttggaagtgagg
caaatattcaaaaccagagctaaagtaatccaatatgttaggaagtttcttgatgatctc
gacttcttggaggttgaaacgccaatgatgaacatgattgctggaggagcagcagcccgt
ccatttgtgaccttccacaatgatcttaacatgaagttatttatgcgcattgcacctgaa
ctctatcttaaggagttagttgttggtggattagaccgtgtatatgagatagggaagcaa
tttaggaacgagggtattgatttgactcataatcctgaattcaccacctgtgagttctac
atggcgtttgctgactacaatgatttgatggagctcactgagaagatgctaagtgggatg
gtgaaggagcttacagggggctataaagtaaaatatcattcaaatgggcttgataatgat
ccgattgagattgacttcactccccctttcaggaggattgacatgatagaggaattagaa
aagatggcaaaccttgatatacccaaggacttatccagtgatgaagctaataaatatctt
agagcggcatgccagaagtttgaaatcaaatgtcctccacctgaaacaactgctcgcttg
ctggataaacttgtggggcacttcctagaagaaacatgcgtgaatcctgctttcatcatc
aaccatccggagattatgagtcccctggcaaagtggcatagagcaagacctagtctaact
gaacgttttgaattgttcatcaacaaacatgaagtatgtaatgcgtacactgaattgaat
gatcctgtagtacaacgccagcggtttgccgaacaacttaaggaccgacagtcgggtgat
gatgaagcaatggctttggatgaaacgttttgtacggcactcgagtatggattgcctcct
actggtggctggggaatgggcattgataggctagctatgttgttgacggattcacagaac
attaaggaagttcttctcttcccagccatgaagccccaagatgaaccaccagcccccaaa
gcctcaactggagtatag
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