Cucurbita pepo subsp. pepo (vegetable marrow): 111805842
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Entry
111805842 CDS
T05351
Name
(RefSeq) SNW/SKI-interacting protein A-like
KO
K06063
SNW domain-containing protein 1
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111805842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpep03041
]
111805842
Spliceosome [BR:
cpep03041
]
Complex B
Other components
Prp19-related factors
111805842
Complex C
111805842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
111805842
NCBI-ProteinID:
XP_023546859
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All DBs
Position
LG11:complement(3884290..3886908)
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AA seq
603 aa
AA seq
DB search
MATLKDLLPAVKSTTVTHYDHSSDPWFKQRFSSSEAEQTSVIKANPVPPYLKRGGFVPRK
VEDFGDGGAFPEIHIAQYPLDMGRDKSSKPGSKILPITVDAHGNVAYDAIVKQNENAKKI
VYSQHKDLIPKILKNDEVSDEDEELQKEIEETTEETKSALEKIVNVRLSAAQPKNVAKHS
SDSKFIKYKPSQQSAAFNSGAKERIIRMVEMPVDPLEPPKFKHKRVPRASGSPPVPVMHS
PPRPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQEVQINDNFAKLSEALY
VAEQKAREAVAMRSKVQKEMLMKQKEKKELELRALAQKARSERTGAAPPTIPYPSERDTV
DTSEMKGEFERVREKEKDLPKETREEREERLQREKIREERRRERERERRLEAKDAAMGKK
SKITRDRDRDISEKVALGMASTGAGREGEVMYDQRLFNQDKGMDSGFANDDQYNIYDKGL
FTAQPTLSTLYRPKKDADSDMYGGADEQLDKIMKTDRFKPDKSFSGTAERSGPRDRPVEF
EREVEEADPFGLDQFLTEVKKGKKAMDKVGSGGTMRAGAGSSMREGYEGGSSGRSRIGFE
RGH
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggcaactctgaaagaccttcttcctgctgtaaagtcaaccactgtaactcactatgat
cattctagtgatccatggttcaagcagcgttttagttcctcagaagcagagcaaacttct
gttatcaaggcaaatccggtgccgccttacttgaagcgtggtgggtttgttccaaggaaa
gtagaggattttggagatggtggtgcttttccagagattcacattgctcaatacccactt
gatatgggtagagacaaatcatcgaagcctggatccaagatccttcctattacagttgat
gctcatgggaatgttgcgtatgatgctattgtcaagcagaatgaaaatgctaaaaagatt
gtgtattcgcaacataaagatctcattccaaagattttgaaaaatgatgaagtgagtgat
gaagatgaagagttgcagaaagagattgaagaaacaaccgaggaaacgaagtctgcactt
gaaaagatagttaatgtgagattgagtgcagcgcagcctaaaaatgttgccaaacattcc
tcggattcgaagtttatcaagtataagccatctcaacaatcagctgcgtttaattcaggt
gccaaggagagaataattagaatggtggagatgccagttgatccacttgagcctccaaag
ttcaagcataaacgtgttcctagagcttcggggtctccacctgtgcctgttatgcattcc
cctcctcgtcctgtcaccgtgaaggatcagcaggattggaagattccaccgtgtatttca
aattggaagaatccaaaaggttatacaatcccacttgacaaacgacttgcagctgatgga
agaggccttcaagaagttcaaattaacgataacttcgcaaagctgtctgaagctctgtat
gttgcagagcagaaagcaagagaagctgttgcaatgagatctaaggttcagaaagaaatg
cttatgaagcagaaggagaagaaggagctggagcttcgagcattagctcagaaagcccgg
tctgagagaactggagctgcacctcctacaattccctatccatctgagagagacacagta
gatacctctgagatgaaaggcgagtttgagcgtgtacgagaaaaggagaaggatttacca
aaggagacaagggaggaaagggaagagcggttgcagcgggagaagattcgtgaagaacga
cgtcgtgagagggaaagggaaagaaggttggaggctaaggatgcagcaatgggaaagaag
agtaagataacaagagacagagatcgtgatatcagcgagaaggttgcacttggcatggct
tctactggagcaggtagagagggagaagttatgtatgaccagaggctatttaaccaagat
aaaggaatggactccggattcgcaaacgacgaccagtacaatatatacgacaagggctta
tttactgctcagcccactctctcaactctttacagacctaaaaaggatgctgattctgat
atgtacggcggcgctgatgaacagttagacaagataatgaagacggatcgcttcaaacca
gacaagtcgttttcaggcactgcagaaaggtctggacctagagataggccagttgagttt
gagagagaggtagaagaagccgatccatttggactcgatcaattcttgaccgaagtgaag
aaaggtaagaaggctatggacaaggttgggtctggtgggacaatgagagctggtgctggt
tcgtcaatgcgggaggggtatgaggggggtagctctggtagaagtcgcattggatttgaa
agagggcattag
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