Cucurbita pepo subsp. pepo (vegetable marrow): 111805846
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Entry
111805846 CDS
T05351
Name
(RefSeq) RING-H2 finger protein ATL34-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpep04121
]
111805846
Enzymes [BR:
cpep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111805846
Ubiquitin system [BR:
cpep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
111805846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
Prok-RING_1
zf-RING_16
zf-RING_6
zf-Nse
Zn_ribbon_IFT122_C
RINGv
DUF805
Prok-RING_4
zf-RING_4
zf-RING-like
Tmpp129
Motif
Other DBs
NCBI-GeneID:
111805846
NCBI-ProteinID:
XP_023546863
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All DBs
Position
LG11:2577331..2578829
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AA seq
370 aa
AA seq
DB search
MTSPPLRRRHVLTGFLIHSILLSHISLAAAQSGGPTVPSPPEMYSFKQTISKRMAVVLIV
LVCFFIVLALLSVYTRQCNDQRFAGHLLLPTAAEGINGRPRRAARGLDAAVIASFPTFVY
SNVKGLKIGKGALECAVCLSEFEDDDTLRLLPKCSHVFHSNCIDAWLVSHSTCPVCRASL
VPKPGDISFAALLDSDSRIHGDDGNRVAGLENCHVGIRIPEGNPPNQGLNQNGPIRSRST
GWRLTGLFPRSHSTGHSLVQIGADYERFTLRLPTEVTNELLNSNLNRARSCVALPRVQSS
RQGYRSELGKSGFVGNRSRSGRSEWWTFFPATPLFRREGSRNDTNVNGNGDGGGRPFVRL
RDDGDGQSQQ
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgacctctccacccctccgccgccgccatgtcctcaccggcttccttatccattccatt
ctcctctcccacatctctctcgccgccgcccaatccggaggacccactgttcccagtccg
ccggagatgtactctttcaaacagacaatcagcaaacgaatggctgtcgttttgattgtt
ctcgtttgcttcttcatcgttcttgccctcctctctgtttacacccgccagtgcaacgat
caacgtttcgccggccaccttctcctccccacagccgcagaaggaatcaacggccgaccc
agaagggcggcgcgtggtctcgatgcagctgttatagcttctttcccaacgttcgtgtat
tccaacgtaaagggtctcaaaattgggaaaggcgcattggaatgcgcggtttgtttatct
gaattcgaagacgatgatacgctgcgattgttgccgaaatgtagccatgtcttccactcc
aattgcatcgacgcttggttggtgtctcactctacctgccctgtttgccgcgctagcctc
gtccccaaacccggcgacatctccttcgctgctctgctcgattccgattcgagaatccac
ggcgatgacggcaatcgagtggccggattggaaaattgtcacgtgggtatacgaattccg
gaggggaatcccccaaatcagggattgaatcagaacggtccaattaggtcgcgatcgacg
ggatggagattgaccggactgttccctcgatcccactcgacgggacactcgctggttcaa
ataggggcggattacgagaggtttactttgagattgccgacggaggtgacaaatgagctg
ttgaattcgaatttgaatcgggcgaggagctgcgtggcgttgccgagggtgcagagttcg
agacaggggtatcgtagtgaattggggaaaagtgggtttgtgggcaatcgaagccgcagt
gggcggtcggagtggtggacattttttccggcgacgccgttgttcagaagggagggttct
agaaatgatactaatgtgaatgggaatggagacggcggtggacggccgtttgtacgattg
cgtgatgatggagatggtcaaagtcaacaataa
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