Cucurbita pepo subsp. pepo (vegetable marrow): 111805935
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Entry
111805935 CDS
T05351
Name
(RefSeq) probable E3 ubiquitin-protein ligase XERICO
KO
K16285
RING/U-box domain-containing protein [EC:
2.3.2.27
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpep04121
]
111805935
Enzymes [BR:
cpep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111805935
Ubiquitin system [BR:
cpep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111805935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-C3HC4_2
DUF1421
zf-ANAPC11
zf-RING_16
UCR_TM
FokI_D1
RINGv
Motif
Other DBs
NCBI-GeneID:
111805935
NCBI-ProteinID:
XP_023547007
LinkDB
All DBs
Position
LG01:complement(9404277..9405520)
Genome browser
AA seq
139 aa
AA seq
DB search
MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEEFDWENGR
ERRISITQFKSLGQSFNNGGTEKGSASRCAMAECCVCLCGFEADEEVSELSCKHFFHKAC
LSKWFDNKHITCPLCRSIE
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgggtctctcgaatttccccccttcagctgaaggagtgttgctgttacctgttcttgtg
atgaacactgtaatgtcgatggcgtttttgaagaacttggtgagatctgtgatacaaatg
atgagtgcgagtgggaatccttcgagttctgaggaagaattcgattgggaaaatggaaga
gaaagaagaatctcaattacccagttcaaatctttgggtcaaagcttcaataatggcgga
acagagaagggctctgcttcgaggtgtgccatggcagagtgctgtgtttgtctttgtggg
tttgaagctgatgaggaagttagtgagttgtcttgcaagcacttttttcataaagcttgt
ctttctaagtggtttgataataagcacattacttgccctctttgtcgttccattgaatag
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