Cucurbita pepo subsp. pepo (vegetable marrow): 111806020
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Entry
111806020 CDS
T05351
Name
(RefSeq) protein PELOTA 1 isoform X1
KO
K06965
protein pelota
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111806020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpep03019
]
111806020
Messenger RNA biogenesis [BR:
cpep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
111806020
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
eRF1_1
eRF1_3
eRF1_2
Motif
Other DBs
NCBI-GeneID:
111806020
NCBI-ProteinID:
XP_023547114
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Position
LG11:complement(5527686..5537033)
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AA seq
379 aa
AA seq
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MKIVRKQLDQNGSGSVKMVPLDSDDLWHAFNLIAPGDTVMAVTVRKVIREMASGGRDAER
VKLKLEIKVEEVADYDKVGSVLRIRGKNILENEHVKIGAYHTLELELHRPFVLRKDVWDS
FALDVLHQASDPAASADLAVVLMQEGLAHVILVGKSMTITRARIETSIPRKHGSAIAGYE
SALNKFFENVLQAFLKHVDFKVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSR
IILTHTTSGYKHSLREVLDASNVMNMIKDTKAAQEVRALKDFFTMLSNEPDRACYGPKHV
EVAHERMAIQTLLITDDLFRNNDITERQKYVNLVDSVKDSGGTVHIFSSMHVSGEQLAQI
TGIAAILRFPLPELEDIEM
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgtacgcaaacagcttgatcagaatgggtctggtagtgtcaagatggtgcca
cttgattcagatgatctatggcatgcgttcaatttgattgctccgggagacactgttatg
gctgtcaccgttaggaaagtcatcagagagatggcttctggaggaagagatgcagaacga
gtgaaactcaagctagaaataaaagttgaggaggtggcagattatgacaaagttggatct
gttttgcggatacgtggaaaaaatattctggaaaatgagcatgtgaagataggggcttac
catactttagaacttgagctgcatcggccatttgttttgagaaaggatgtttgggactct
tttgctctagatgtacttcatcaagcctctgatcctgctgctagtgctgacttggccgtg
gttttaatgcaagaaggattagcacatgttattcttgtcggaaaaagtatgacaattact
cgagctcgaatcgaaacttcaattcctcgcaagcatgggtcagccattgctggttatgag
tcggccttgaataaattcttcgagaatgttttacaggctttcttgaagcatgttgatttt
aaagtggtacgctgtgcagtgatagctagtcctggatttaccaaggatcagttccatcgg
cacttattattggaagctgaaagaagacagctaagacctattatcgagaacaaatcccgc
ataattctaacacatacaacctcaggatacaagcatagtttacgagaggttttggatgct
tcaaatgtcatgaatatgataaaagacactaaagcagctcaagaggtgcgagctctaaag
gatttctttaccatgctctctaatgagccagaccgtgcttgttatggaccaaaacacgtg
gaggttgcccatgaacgaatggctattcaaacgcttctcattactgatgatctcttcagg
aataatgatataacggagcgacaaaaatacgtcaatttggtcgattcagttaaggattca
ggtggcaccgttcatatattttcatccatgcacgtctctggagagcaactcgctcagata
actggaattgcagcaatccttcgatttcctctgccggaactcgaggacatagagatgtaa
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