KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111806360
Entry
111806360         CDS       T05351                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cpep03036]
    111806360
   03400 DNA repair and recombination proteins [BR:cpep03400]
    111806360
Chromosome and associated proteins [BR:cpep03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    111806360
DNA repair and recombination proteins [BR:cpep03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     111806360
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT_EZ
Other DBs
NCBI-GeneID: 111806360
NCBI-ProteinID: XP_023547397
LinkDB
Position
LG12:6328700..6345403
AA seq 1148 aa
MAELSKLTHYIESFVDVSHTPSQQATSLEAIISLVKNNVVTIKTLVTEMGMYLTITDHII
RGRGILLLGEVLACLASKPLDDATIHSLMTFFTERLEDWKALRGALIGCLALMRRKTEVG
AVSQNDAKSFAQSYFQNLQVQSLGQHDRKLSFELLVCLLEHYPDAVVSLGDDLVYGICEA
IDGEKDPHCLMLTFHIVELVAKLFPDPTGTLASSSSDLFEFLGCYFPIHFTHGKEEDVDV
TRNDLSQALMMAFSSNPLFEPFAIPLLLEKLSSSLPLAKIDSLKYLSDCTVKYGADRMEK
HSEAIWSSVKEIIFTSIEQPFLSFNLESLDSPSFQGNEMIIEALRLLQKMVVESNGSFLR
LIINDEDIKEIFNILNIYTCYNDLPLQSRQRLNAVGHILYKSANASVASCNHVFESFFLR
LLDFVGISVDQSDNYKISPSRNFNFGALYLCIELLAACRDLYASCDEQTCSVKEKSYNML
QTFSCALVQLLNSTFPGTAKKDLHDDEFYCAVKGLRNLATFPVGSSPVSSVVFEDILLGL
MSFITMNLECGSLWNHALKALQHIGSFVDRYHGSVEWQSYMHVVVEKIAPMFSLHDEALP
LTLKLKMASDIGRSGRSYMLKIVQGIEEATSFHLSEVYSNGNSESVEILLSLLDCYSTKI
LPWFDEAGDVEEVILRITFNIWDQIEKCLVFSTSMDKALLDATMMALKLSVRSCSKESQN
IIIQKAFNVLLTSSFSPSKVALSTTIPVQMEGLQLLQQKDSPLSRDEWILSLFASVIIAL
RPQIHVPDVRSVMRLLMLSITRGCIPAAQALGSMINKLSLKSDKVEVSNYVSLEEAIDII
FNTKFRCFHNESTRDGSEMLLTDLCSSIEKGSLIPVHAVVGLSWIGKGLLLFGHEKVRDV
TMVFLQCLVSKSRTDASPLQKVILEKNCETNLDFAVMNGAADAFHILMSDSETCLNRKFH
AILRPLYKQRFFSTMMPIFQSLVSKSYESLSRYMLYEAFAHVICDTPLTAILSDAKKVSL
NLIPMLLDGLLALSVNIINKDVVYSLLLVLSGILMDKNGQEAVTENAHKIVDCLAGLTAF
PHMMLVRETAIQCLVAVSELPHARIYPMRMQVLHAISKALDDPKRAVRQEAVRCRQAWAS
IASRSLIF
NT seq 3447 nt   +upstreamnt  +downstreamnt
atggcggagctcagtaagcttacacactacatcgagtccttcgtcgacgtatctcatact
ccgtctcaacaggccacgagcttggaagcaatcatctcccttgtgaagaacaatgttgta
acaataaaaacactggttacagagatgggtatgtatttgacaattactgatcacattatt
cgaggcagaggtatacttcttcttggggaagtacttgcatgtcttgcatcaaagcctctg
gatgatgcaacaatacacagtctaatgacgttctttacagagagactggaagattggaaa
gctttacggggtgccctaattggctgcttggcactgatgaggaggaaaacggaagttggg
gcagtttctcagaatgatgcgaagtcttttgcccagtcttattttcaaaatcttcaagta
cagtccttgggacagcatgatcggaagctgagttttgaacttctggtgtgccttttggaa
cattatcctgatgctgttgtttcactgggtgatgatcttgtgtatggaatctgtgaagcc
attgatggtgaaaaagatccacactgcttaatgcttacttttcacatcgtcgagcttgtg
gcaaagctattcccagatccaactggaacacttgcaagtagttctagcgatctttttgaa
ttcttgggttgctatttcccaatacattttacacatggaaaagaggaggatgttgatgta
acaaggaatgatctttcgcaggcacttatgatggccttctcatcaaaccccctctttgag
ccatttgcaattcctttgcttcttgagaaactttcatcgtcattgccactagcaaagatt
gattctttgaagtatctgagtgattgcaccgtaaaatatggggcagatagaatggaaaag
catagtgaagctatctggtcttcagtaaaggagatcatatttacatcaatagaacaacct
tttttgtcctttaacttagaatcattggatagtcctagctttcaagggaatgaaatgata
atagaagctctaagactcctgcagaagatggttgtggagagtaatggatcatttttaaga
ttaattatcaatgatgaagatataaaggaaatttttaacatcctaaatatttatacatgt
tacaacgacctccctctgcaaagcaggcagagactaaatgcagttggccatatcctttac
aagtcagcaaatgcatctgttgcttcctgcaaccatgtgtttgaaagtttcttccttcgt
ttgctggattttgtggggatttcagtggaccagtctgataattacaaaatttctccctcg
aggaattttaactttggagccctctatctctgcatcgaactacttgcagcatgcagagat
ctgtatgcaagctgtgatgaacaaacatgctctgttaaagagaaatcatacaacatgctt
caaactttttcgtgtgcattggttcagctcctcaattctacctttccaggaactgctaag
aaagatctgcatgatgatgaattctattgtgcagtaaagggcttgcggaatctggccaca
ttccctgtaggttcttcacccgtatcaagtgtcgtatttgaggatattttgttgggtctc
atgtcatttataaccatgaacctcgaatgtggatcgttgtggaatcatgccttgaaggca
ttacaacatattggctcatttgtcgacagatatcatgggtctgtggaatggcaaagttac
atgcatgttgttgttgaaaagattgcaccaatgttctctcttcatgacgaggccttgcca
ctgacacttaaacttaaaatggcttctgacattggtagatctgggcgaagttatatgctg
aaaattgttcaggggatcgaagaggcaacgtccttccatttatctgaggtttatagcaat
ggcaattcagagtcagtcgagattctattgtccctgttggattgctactcgaccaaaatt
cttccatggtttgatgaggctggagatgttgaggaagtcatattgcgcattacatttaac
atttgggatcaaattgaaaaatgtttagtttttagcacatcgatggataaagcgcttcta
gatgctaccatgatggcattgaaactctctgttcgaagttgttcgaaagagagccagaac
attataatccaaaaagcattcaatgtattattaacaagcagtttttctccttcgaaagta
gcattatctacaacaataccagttcagatggagggcttacaacttctgcagcagaaagat
agtcctctttccagagatgaatggatcctttcattatttgcatcagtcattatagcactt
cgtccacaaatacatgttcccgatgtgagatcagtaatgcgtttgcttatgttatccatc
accaggggctgtataccagctgcacaggcactaggttctatgatcaataaattgagtctg
aagtctgataaagtagaagtctcaaattatgtttctttggaagaagctattgacattatt
ttcaacacaaaatttaggtgcttccataatgaaagtactcgtgatggcagtgaaatgctg
ctcacagatttatgctccagcattgaaaaaggctctttgattccagttcatgctgtggtt
ggattatcatggattggaaaaggtttgcttctttttggtcatgaaaaggtccgagatgtt
accatggttttcttgcagtgcttagtatcaaaaagtagaacagatgcctcacccttgcag
aaggttatactggaaaaaaattgcgagacaaacttagactttgcagtcatgaatggtgca
gcagatgcatttcacattcttatgagtgattctgaaacatgtttgaaccgcaaattccat
gcaatactacgaccactttataagcagcgttttttctctaccatgatgcccattttccag
tctctagtaagcaaatcttatgagtcactttccagatacatgttgtacgaggcatttgca
catgtcatatgtgatactccactcactgctatattgagtgatgcgaagaaggttagctta
aatcttattcctatgcttttggatgggttgttagcattaagtgtgaacatcataaataag
gacgtggtttatagccttcttcttgttttatctgggatattgatggataaaaatggacaa
gaagctgtcacagagaatgcacataaaattgttgattgccttgctggactgactgccttt
cctcatatgatgcttgtacgagaaactgctattcagtgccttgtcgcggtatctgagcta
ccccatgcaaggatataccccatgagaatgcaggtactgcatgcaatatcgaaagctctt
gatgatccaaagagagctgttcgacaagaagctgttcgatgccggcaagcatgggcatca
attgcatcaagaagtcttattttctga

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