Cucurbita pepo subsp. pepo (vegetable marrow): 111806406
Help
Entry
111806406 CDS
T05351
Name
(RefSeq) CLIP-associated protein-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpep03036
]
111806406
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cpep04812
]
111806406
Chromosome and associated proteins [BR:
cpep03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
111806406
Cytoskeleton proteins [BR:
cpep04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
111806406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT
HEAT_EZ
Vac14_Fab1_bd
HEAT_2
Adaptin_N
Cnd1
Maestro_HEAT
Tti2
UTP20_C
MMS19_N
MMS19_C
Sec7-like_HUS
Dopey_N
TAF6_C
CRM1_C
V-ATPase_H_N
Rif1_N
GnHR_trans
SEN1_N
Motif
Other DBs
NCBI-GeneID:
111806406
NCBI-ProteinID:
XP_023547473
LinkDB
All DBs
Position
LG12:complement(9486451..9500486)
Genome browser
AA seq
1440 aa
AA seq
DB search
MEEALELARAKDTKERMAGVERLYELLEASRKSLNSAETTALVDCCLDLLKDNNFRVSQG
ALQALASAAVLSGEHLKLHFNALVPAVVERLGDAKQPVREAARRLLLTLMEISSPTIIVE
RAGSYAWSHKSWRIREEFARTVTSAIGLFASTELTLQRAVLPSILQMLNDPNPGVREAAI
VCIEEMYTQAGPQLRDELQRHHLPTYMVKDINARLEKITPQVRSSEGLTGNFAVGDMKPV
NINSKKSSPKAKSSNREVSLFGGESDVTEKQVDPVKVYSEKELIREIEKIASILVPEKDW
SIRIAAMQRVEGLVSGGAADYPSFKGLLKQMVGPLSTQLSDRRSSIVKQACHLLCFLSKE
LLGDFEACAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADSAKSDRN
AVLRARCCEYALLILEHWPDAPEIQRSADLFEDLIRCCVADAMSEVRATARVLYRMFAKT
WPERSRRLFSSFDLVIQRLINEEDGGIHRRHASPSVRDRGTMMSLNSQPSTGSSLPGYGT
SAIVAMDRSSSLSSGTSLSSGILSQSKTSGDGPERSLESVLHSSKQKVSAIESMLRGLDL
SEKHNPNLRSSSLDLGVDPPSSRDPPFPQALPASNHFSNSSAADLTASNTNKIRSRQGGL
GLSDIISQIQASKCSGKLSHRTNVANEPLSTFSSYSAKRVVDRHQERGFVEENNDIREAK
RYITPQIEKHYLDASYRDGSYKDSHNSYIPNFQRPLLRKNAGGRMSATRRRSFDDSQLPL
GEMSSYVDSPASLSDALSEGLNPSSDWCTRVGTFNYLQSLLQQGSKGIQEVLQNFEKVMK
LFFQHLDDPHHKVAQAALSTLADIIPTCRKPFESYMERILPHVFSRLIDPKELVRQPCST
TLEIVSKTYSTDSLLPALLRSLDEQRSPKAKLAVIEFAINSFNKHVVNSEGFSNNGILKL
WLAKLTPLVYDKNTKLKESAITCIISVYSHFEPAAVLNYILSLSVEEQNSLRRALKQYTP
RIEVDLMNFLQNKKERQRPKSLYDPSDVVGTSSEEGYVSMSKKSQFFGRYSAGSLDDKSG
MKWNMNQESTLVTRSIGQAATSDEVCENLYHNFDYGSCNDVINVKTKDMHYLENSTDPNL
GSRTSLVENDANSVNFDDLSSLHLVNGEIDSDHLRIAENAAYNDEASLELESHQHKTKTV
NSMVDTGPSIPQILHLISTGNSESPSASKCSALQQLIETSISNDPSIWSKYFNQILTVIL
EVFDNSDSSVRELALSLITEMIKNQRDSMEDSVEIVIEKLLHVTKDIIPKVSSDAEHCLT
VVLSQYDPFRCLSVITPLLVTEDEKTLVTCINCLTKLVGRLSQEELMTQLPTFLPALFEA
FGHQSADVRKTVVFCLVDIYIMLGKQFLPHLEGLNSTQLRLVTIYANRISQARTGTAIDA
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagcattggaactggctcgtgccaaggacaccaaagagcgcatggctggtgtc
gaacgcctctatgaacttcttgaagcttccaggaagagcttgaattctgctgagactacg
gccttggttgattgctgcctcgatcttctcaaagataacaactttagggtttcccagggt
gctctccaggctttggcttctgctgctgtgctctctggcgagcatctcaagcttcatttt
aatgcccttgtccctgccgtcgtcgagcggttgggtgatgccaagcagcctgtgagagaa
gccgccaggaggctcttgctcactctgatggagatttcttcaccgacaatcattgttgaa
agagctggctcttatgcgtggtcacataagagctggagaatacgagaagagttcgcaaga
actgttacatcagccattggtttatttgcatcaactgagcttacacttcagcgggctgta
ctaccttcgattttgcagatgttgaatgatccaaatcccggagttagggaagcagctata
gtctgtattgaggagatgtatacacaggctggaccacagttgcgtgacgagcttcagcgc
catcaccttcctacctatatggtgaaagatattaatgcccgtctagaaaaaattacgcct
caagttcggtcctcggaaggacttacagggaattttgcagttggagacatgaagccggta
aatattaactctaagaaaagtagtccaaaggctaaaagttctaacagagaggtttctctt
tttggaggtgaaagtgacgtaactgaaaagcaggtagatcctgtaaaagtatattcggag
aaggagctaataagagaaattgagaagatagcttctatccttgttccggaaaaagattgg
tctattcgcatagcagccatgcagagagtagagggccttgtttctggaggagctgctgac
tatccaagttttaagggattgttgaaacaaatggttggacctctcagtactcaattatct
gatagaagatctagcatagtaaaacaggcttgccatttgttatgctttttgtccaaggaa
cttttgggagattttgaagcctgcgctgaaatgtttattccagtccttttcaagctggtt
gttattactgtacttgtaattgcagaatccgctgataattgcataaaaacgatgctgcgt
aactgtaaagttgcacgtgtgcttcctcgcatagctgatagtgcaaaaagtgatcgaaat
gctgtactacgtgcacgatgttgtgaatatgcacttctcattcttgagcactggcctgat
gcacctgagattcagcgatctgctgatttatttgaggatctaatcaggtgctgtgttgct
gatgcaatgagtgaggttcgagccactgcacgagtattatacaggatgtttgcaaaaact
tggccagagcgttccagacgattattttcctcatttgaccttgtgattcaaaggttaatt
aatgaagaggatgggggtatacataggcgacatgcttctccatctgttcgtgatagaggt
acaatgatgtcactcaactctcaaccatctactggttcaagcttacctggatatggaact
tctgctattgttgctatggatagaagttcaagtttatcatctgggacatcgctctcttct
ggaattctgtctcagtcaaagacttctggtgatggtcctgaacgtagtttggagagtgtg
ttgcattcgagcaaacagaaggtcagtgcaattgaaagcatgctcagaggcttggattta
tctgagaaacacaacccaaatcttcgatcatcgagtttggatctaggagttgaccctcca
tcatctcgtgatccaccttttcctcaagctctgcccgcatctaatcatttcagtaactct
tctgcagctgatctaactgcgtcaaatacgaataaaattaggagccgtcaaggtggattg
ggcttatctgatatcatcagtcaaattcaagcttccaaatgttctggtaaattgtcacat
cgcaccaatgtggctaacgaacctttgtctactttttcatcgtactcagcaaagcgggtt
gttgatcgacaccaagaaaggggtttcgttgaagagaataatgatattagagaggctaag
cggtatattactccacaaattgagaagcattacttggatgcatcttatagggatgggagt
tacaaggattctcataatagttatattcccaacttccagagaccactgttgagaaagaat
gcaggtgggcgaatgtctgcaaccaggcgtaggagttttgatgatagccagctaccactt
ggagaaatgtcaagttacgttgacagtccagcatctctcagtgatgctcttagtgaggga
cttaacccatcttctgactggtgtactagggttggcacctttaattatcttcagtctctg
ctgcagcagggttcaaaaggaatacaggaagtgcttcaaaattttgagaaggtaatgaag
ttgtttttccagcacttggatgacccacaccataaagttgcacaggctgcactttcaaca
ctggctgatataattccaacctgccgaaagccatttgagagctatatggaaaggatctta
ccccatgttttctctcggttgattgacccaaaggagttagttagacaaccctgctcgaca
actttggaaattgttagtaaaacttatagtaccgattctctcttacctgctttactccgt
tctttggatgaacagcggtcaccaaaggcaaagctggctgttattgagtttgctataaat
tcttttaacaagcatgtagtaaattctgagggctttagtaataatggcatcctaaagtta
tggctcgctaaattgacaccattggtttatgataaaaacaccaagttgaaggaatcagcc
attacatgcatcatatctgtttattcacactttgaaccagcagctgtcttgaattatatt
cttagcctatcagttgaagaacaaaattccttgaggcgagctcttaaacaatatacacct
cgcattgaggtggacttgatgaacttcttacagaacaagaaggaacgtcaacgacccaag
tccttgtatgacccatctgatgtggttggaacatcttctgaggaagggtatgttagtatg
tccaaaaagagtcaattttttggtagatattcagctggttctcttgatgacaagagtggt
atgaagtggaatatgaaccaggaatcaaccctggtaacgaggagcattggtcaggctgct
acttctgacgaagtttgtgagaatttgtaccataattttgattatggttcctgcaatgat
gttattaatgtgaaaaccaaagatatgcattatttggaaaattccactgatccgaacctt
ggatcacggacaagtctggtggaaaatgatgctaatagtgttaatttcgatgatttatct
tccctgcatttggtcaacggtgagattgacagcgaccacttaagaattgctgaaaatgct
gcatacaatgacgaggcttcactagaacttgaatctcaccaacacaaaactaaaactgtc
aactccatggtggatacaggccctagcattcctcaaattcttcacctgatcagtactggc
aatagcgaaagcccttctgcaagcaaatgcagtgcgcttcagcagttaattgaaacttcc
ataagtaatgatccgtccatttggtccaagtacttcaatcaaattttgacagtgatactg
gaagtgtttgataattctgattcctcagtacgtgagcttgctctttcattgataactgaa
atgattaagaatcagagggactctatggaagattctgttgagatcgttattgagaaactg
cttcatgttaccaaggacattattcccaaagtatcaagtgatgcagagcattgcctgact
gttgtgttatctcagtatgatccattcagatgcttaagtgttattactcctctgttggtt
accgaggatgagaaaactcttgttacatgcatcaattgcttgacaaagcttgtcggtcgg
ctgtcacaagaagagttgatgacacagttgcccacttttttgcctgctctctttgaagca
tttggacaccagagtgctgatgtgagaaagactgttgtcttctgtcttgttgacatctac
ataatgctggggaaacaatttttgccacacttggagggactcaacagcactcaactacgt
ttggttacaatttacgccaatcgaatttcgcaagctaggacgggaaccgccattgacgct
tag
DBGET
integrated database retrieval system
