Cucurbita pepo subsp. pepo (vegetable marrow): 111806540
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Entry
111806540 CDS
T05351
Name
(RefSeq) adenine DNA glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
111806540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpep03400
]
111806540
Enzymes [BR:
cpep01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
111806540
DNA repair and recombination proteins [BR:
cpep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
111806540
Prokaryotic type
111806540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
EndIII_4Fe-2S
Y1_Tnp
HHH_8
Cdd1
Motif
Other DBs
NCBI-GeneID:
111806540
NCBI-ProteinID:
XP_023547668
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Position
LG12:complement(9693723..9699954)
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AA seq
464 aa
AA seq
DB search
MSGGEKNENEEDVKKKPTKGEKRRGRSPSKREPIADIEDIMFSIDKVQTMRSSLLDWYDL
SHRDLPWRRLDKGQPQTRGYGVWVSEIMLQQTRVQTVVEYYKRWMHKWPTVQHLSRASLE
EVNEMWAGLGYYRRARFLLEGAKLIVKEGGEFPKTVSALRKIPGIGEYTAGAIASIAFDE
VVPVVDGNVIRVIARLKAISGNPKDSKLVKQVWKAAAQLVDPSRPGDFNQALMELGATLC
TPTSPSCSTCPVFDHCEALSISKDDSSVLVTDYPAKGIKTKQRHDYSAVCVVEILENQGS
SELKQSSRFLLVKRPDEGLLAGLWEFPSVLLKGEADSSTRRESMNSLLSKSFGLEPKKNF
DIVIREDVGDFIHVFSHIRLKIYVEHLVLRLKGEGSKLFRKQEKKSISWKCVDNKVMSSV
GLTSSVRKVYAMVEKFEADKISPIRAVATKKQRATSTNLSCRSC
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcggagaaaagaacgagaacgaggaggatgtgaaaaagaaaccaacgaagggg
gaaaagcgccggggccgaagtccgtccaaaagggaaccaatcgctgacattgaagatatt
atgttcagcatagataaagttcagacaatgaggtcatcgctattggattggtacgacctt
agccatagggaccttccttggaggaggttggacaaagggcagcctcaaacacggggttat
ggtgtgtgggtatcagaaataatgctgcagcagacgagagttcagaccgtcgttgaatat
tacaagcgttggatgcataaatggcccaccgttcaacatctctctcgtgcttctctcgag
gaggtgaatgaaatgtgggcaggcttgggatactatagacgagctcgttttcttttagag
ggtgcaaagttgatagtcaaagaaggtggcgaatttcctaaaacggtttctgcccttcga
aaaattcctggaattggagagtatacagcaggggctattgcctccatagcatttgatgaa
gtggtgcctgtggttgatggtaatgtgattcgggtaatcgctcgattaaaggctatttca
ggaaatccgaaagactcaaagttggttaagcaagtttggaaggcagctgctcaattagtt
gatccttccaggcctggggacttcaatcaggcactcatggaacttggtgcaactttatgc
acaccaacaagcccaagctgctcaacatgccctgtgtttgatcactgtgaggccctttca
atctcaaaggatgatagttcagttcttgtcacagattatcccgctaagggtataaagacc
aaacaaagacatgattactctgctgtttgtgtggttgagatattggaaaatcagggctca
tctgagttgaagcaatccagtagatttcttcttgtaaagaggcctgatgaaggcttgctt
gctggcctatgggagttcccatctgtcttgttgaagggagaagctgattcaagtacaagg
agagaatccatgaacagcctcttgagtaaatcctttggacttgaaccaaaaaagaatttt
gatatcgttattagagaagatgttggagattttatccatgttttctcgcacatccgtctc
aagatatatgttgaacacttggtgttacgtttaaaaggtgaaggtagcaagttgtttcgg
aaacaggagaagaaatctatatcatggaaatgtgtggacaacaaggttatgtccagcgtg
gggttgacgtccagtgtgaggaaggtgtatgccatggtggagaaatttgaggcagataag
atatctcccatccgtgcagtagccacaaaaaaacagagagctacttcaacaaacttgagc
tgcaggagctgttga
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