Cucurbita pepo subsp. pepo (vegetable marrow): 111806557
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Entry
111806557 CDS
T05351
Name
(RefSeq) polygalacturonase QRT2-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep00040
Pentose and glucuronate interconversions
cpep01100
Metabolic pathways
Module
cpep_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111806557
Enzymes [BR:
cpep01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
111806557
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Sre
Motif
Other DBs
NCBI-GeneID:
111806557
NCBI-ProteinID:
XP_023547692
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Position
LG12:7381659..7385487
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AA seq
455 aa
AA seq
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MCRGLLGRRCRLPFLIAIVVFEFFSACSSSYADVDPPPLINRGDGKDRDHQHYGYSSKFS
SMLTTRLEKMASSPVASSEIFNVDDYGAMGDGEDDSQAFKEAWKEACSSTNAIFLVPNDR
TYHLKPITFSGPCNSPFVFKIEGTIKASPHISDYEKDRRHWIVFENLAEFTVEGKGTING
NGRKWWLNSCKVNKTLPCKEAPTAVTFYQCTNLRVEGLRFRNAQKMHLSFQKCSNVKALN
LWIYAPGNSPNTDGIHVTATQIILIQNCLIMTGDDCISIVSGSKNVRAKGITCGPGHGIS
IGSLGAGKSEAEVSNVVVDTAKFKGTSNGVRIKTWQGGKGYAENIIFQNIVMDNVTNPII
IDQNYCDQKEPCTQQAEAVQVSNVMYQNIRGTSGSEVAVKFDCSKSFPCQEILLQDIDLV
HRDKADDKPTQAEASCKNARLKNRGRVSPQCPGRR
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcggggattgctcggtcgtcgttgtcgtcttccctttctcatcgccattgtcgtt
tttgagtttttctcggcctgctctagctcgtacgctgacgttgatcctccccctttgatt
aaccgtggtgatgggaaggatcgtgatcaccagcattatgggtactcttccaaattctcg
agcatgttgacaacgaggttggagaaaatggcttcgtcgcccgtggcgtcgtcggagata
tttaacgtggatgattatggggcaatgggcgatggagaagacgatagtcaggcgtttaaa
gaagcttggaaggaagcttgttcgtccacgaatgccatctttttggttcctaatgatcga
acttatcatcttaagccaatcacattttcggggccttgtaactctccttttgtatttaag
attgaagggacaataaaagcctccccacatatatcagattacgagaaagacagaaggcat
tggattgtatttgaaaatctagcagaatttacagtggaaggtaaaggcaccattaatgga
aatggaagaaaatggtggttaaattcatgcaaagtcaacaaaacccttccctgcaaggaa
gctccaacagctgttactttctatcaatgtaccaatctgagagtggaagggctgaggttc
agaaatgcacaaaagatgcatctttcctttcagaaatgcagcaatgtcaaagctctaaat
ctatggatttatgcaccaggaaacagccccaacactgatggcattcatgtcacggccaca
caaatcattctcatccaaaactgtcttataatgactggtgatgactgtatttcgatcgta
agtgggtcgaaaaatgttcgagcaaagggcataacttgtggaccgggccatgggatcagt
attggaagcttgggagctggaaaatcagaagctgaggtttctaatgtggtggttgataca
gcaaagtttaaaggaacatcaaatggagtgagaatcaaaacttggcagggaggcaaaggg
tatgcagaaaacataatattccagaacattgtgatggacaatgtgaccaacccaataatc
atagatcaaaactactgtgatcagaaagaaccatgtacacaacaggcagaagcagtacaa
gtgagtaatgtaatgtaccagaacatcagaggcacaagcggttcggaagtggctgtgaaa
ttcgattgcagcaaaagcttcccatgtcaggagattcttctacaagacatcgatcttgtc
cacagagataaagcagacgataaacccacccaagccgaagcttcctgtaaaaatgccaga
ttgaagaatagaggaagggtttcaccacagtgccctggacgacgatga
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