Cucurbita pepo subsp. pepo (vegetable marrow): 111806702
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Entry
111806702 CDS
T05351
Name
(RefSeq) structural maintenance of chromosomes protein 5 isoform X1
KO
K22803
structural maintenance of chromosomes protein 5
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpep03400
]
111806702
DNA repair and recombination proteins [BR:
cpep03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
111806702
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_29
AAA_15
FKBP15
ABC_tran
AAA_27
Motif
Other DBs
NCBI-GeneID:
111806702
NCBI-ProteinID:
XP_023547888
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Position
LG12:7452779..7467532
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AA seq
1053 aa
AA seq
DB search
MAEAKRRAKRPRITRGDDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSS
IVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNSKEENITITRKMDTHNKS
EWLFNGKVVPKKDVAGIIQSFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQ
LPILHRVLVEKSHDIKNIERAVEKNGDTLDQLKALNVEQEKDVERVRQREELLKKVESMK
KKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIEKQRKEKAKLDAKTKKY
STLINNNHKKRMELQETGNHLGVQVQGKLKEMEDLRKQEESRQQRILQAKEELEAAELEL
QNLPPFKHPKDEIERLRAQILELEVSASQKRLMKSEIEKNISQKRNTLRQCLDRLKDMEN
TNTKLLQALRNSGTEKIFEAYHWLQEHRHEFKKEVYGPVLLEVNVSNRTHADYLEGHIPS
YAWKSFITQDSDDRDIMVKNLGSFGVPILNYVGGERRTNQHFEVSEEVRAFGIYSRLDQI
FDAPAAVKEVLTMQFGLEHSYIGSKVTDQKADEVSKLGILDFWTPDNHYRWSRSRYGGHM
SGTVDPVDRSRLLLCNLDAGEIDGLRSRKNELEESISALEENCKSCQTELRLIEDEEAKL
RKHRDDILNTVQHEKRKRREMENRIDQRKKKLESMEREDDLDTVVAKLADQATNFNVQRF
HCAIEIKHLLVEAVSYRQNLTKSHMSSIEIEAKIRELEVNLKQHEKFALQASVQFEYCKK
EVEDYRQQLSVAKKYAESIAVITPDLEKEFLEMPTTIEELEAAIQDNISQANSILFLNHN
VLEEYEHRQRQINTIARKLEADKHELRKCMAEVDELKGNWLPTLRKLVSQINETFSRNFQ
EMAVAGEVLLDEHDMDFDQYGILIKVKFRQAGQLQVLSAHHQSGGERSVSTILYLVSLQD
LTNCPFRVVDEINQGMDPINERKMFQQLVRAASQTNTPQCFLLTPKLLPELEYSGACSIL
NIMNGPWIEQPSKAWSNGDSWGTLMNYVGASRC
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagccaaacgtcgcgcaaagcgccctagaattacgaggggggacgatgattat
atgcctggaagtataattgagattgagcttcataactttatgacctttaaccacttgaaa
tgtaaaccaggatcacgtctaaaccttgtaattgggcccaatggatctggtaaaagctct
attgtatgtgctattgcccttggccttggtggtgagcctcagctccttggaagggcgacc
agtgttggagcatatgtgaagcgcggggaggagtctggttatgtcagaataaccttgaga
gggaatagtaaagaggagaatattacaattacacgtaaaatggacacacacaacaaatct
gagtggttgttcaatggaaaagttgtgccaaaaaaggatgtagctggaatcattcaaagt
tttaacattcaagttaataacttgactcaatttttacctcaggacagggtttgtgagttt
gccaaattaactcccgtccaacttttagaagagactgaaaaggcagttggtgatcctcaa
cttccaatcctacatcgtgtacttgttgagaaaagccatgacataaaaaatatagaacga
gctgttgagaaaaatggagacaccctagatcagctaaaggcattaaatgtcgagcaggag
aaagatgttgagcgtgttcgtcaaagagaagaacttttaaaaaaggttgagtccatgaaa
aagaagctgccatggctgaagtatgacatgaaaaaggctgaatacatggaagttaaggaa
aaggaaaaggaggcaaaaaagaagttagatgaagctgcaaatactttgaatgatttaaag
gagccaattgagaaacaaagaaaggagaaggcaaagttggatgcgaaaactaaaaagtat
agcactctcattaataataatcacaagaaaagaatggaacttcaggaaactggaaatcat
ttgggggtgcaagtgcaaggaaaattgaaagaaatggaagacttgaggaaacaagaagaa
tctcgtcaacagagaatcttacaggctaaagaggaacttgaagctgctgaattggaactt
cagaatttgcctcctttcaaacatcccaaggacgagattgaacggttgcgcgctcaaatt
ttggagctggaagtttcagcaagtcagaagagacttatgaagtcagagattgaaaaaaat
atatcccaaaaaagaaatactttgaggcagtgcttggataggttaaaggatatggagaat
actaatacaaaactactacaggcattgagaaattctggaacagagaagatttttgaagct
tatcactggcttcaagaacatcgccatgaattcaagaaggaggtgtatggtccagtgttg
ctagaggttaatgtgtcaaatcggactcatgctgactacttagaaggtcatatcccatca
tatgcctggaagtccttcataactcaagattcggatgatcgtgacataatggtaaaaaac
ttgggttcatttggtgttcccatcttaaactatgtgggaggtgaaaggcgcacaaatcag
cattttgaggtgtctgaggaggttcgtgcatttggcatatattcccggctagaccaaatt
tttgatgctcctgcagctgtaaaggaggttttgaccatgcagtttggtttggagcattca
tatattggctcaaaggtaactgatcagaaggcagacgaggtctcaaaattgggaatttta
gatttttggactccagataatcattatcgatggtctcgctctagatacggtggtcatatg
tcaggaactgtggatccagttgatcgctcacgtcttctcttgtgcaacttggatgcggga
gaaattgatgggcttcggtccaggaaaaatgagctagaagaatctatttctgctttagaa
gaaaattgtaaatcatgtcagactgaactaagattgatagaggacgaagaagctaaactt
cgcaaacatcgggatgatattttaaatactgtgcaacatgagaagagaaaacgccgtgaa
atggaaaatcgcattgatcaaagaaaaaagaaattagaatctatggagcgggaagatgac
ttagatactgttgtggccaagcttgccgaccaagctacaaattttaacgttcaaaggttc
cattgtgcaattgaaattaagcatttgcttgttgaggccgtttcctatagacagaacttg
actaagagccatatgtcctccattgaaattgaagcaaagatcagagaattggaggtaaat
ctgaagcagcatgaaaagtttgctctgcaagcgtcagtgcagtttgagtactgcaagaag
gaagtcgaggactatcgacagcaactctcagttgccaagaagtatgcagaatctattgct
gtgatcacacctgatctcgagaaggaatttcttgagatgcctactacaattgaggaattg
gaagctgctattcaagataatatttctcaggctaattccattctattcttaaaccataat
gtgcttgaggaatacgaacatcgtcagcgtcagataaataccattgcacgaaaactagaa
gctgataaacatgaactaaggaagtgtatggctgaagttgatgagctgaagggaaattgg
ctcccaactttaagaaaacttgtttctcagataaatgagacttttagtcgcaattttcaa
gagatggctgttgctggagaagtgttattggatgagcatgatatggacttcgatcaatat
gggattcttattaaagtgaagttcagacaagcaggtcagcttcaggttctcagtgcacat
catcaatcgggaggggaacgctcggtgtcgacaatcttgtatcttgtttcccttcaagac
cttaccaactgcccatttagagtagttgacgagataaaccaaggaatggatcccataaat
gaacggaagatgttccagcagttggtgagagctgccagccaaacaaatacaccacagtgc
ttcctactcactccaaagttacttccagaactggaatatagtggggcctgtagtatactg
aatataatgaatggtccttggatcgagcagccctcgaaagcatggagcaatggagatagc
tggggaacattaatgaactacgttggagcaagccgatgttga
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