Cucurbita pepo subsp. pepo (vegetable marrow): 111806825
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Entry
111806825 CDS
T05351
Name
(RefSeq) probable serine/threonine protein phosphatase 2A regulatory subunit B''delta
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03015
mRNA surveillance pathway
cpep04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111806825
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
111806825
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cpep01009
]
111806825
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpep03019
]
111806825
03036 Chromosome and associated proteins [BR:
cpep03036
]
111806825
Protein phosphatases and associated proteins [BR:
cpep01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
111806825
Messenger RNA biogenesis [BR:
cpep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
111806825
Chromosome and associated proteins [BR:
cpep03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
111806825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
P2R3B_EF-hand
DUF4187
DUF929
Motif
Other DBs
NCBI-GeneID:
111806825
NCBI-ProteinID:
XP_023548077
LinkDB
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Position
LG12:complement(857325..864183)
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AA seq
539 aa
AA seq
DB search
MDMDAGGDLEFPLVLEMLQLPEVSYFALKSNPYVVEALFSQWLSLPGTGRLVNSLITDAK
SGASLNVGGNSTGIDGVSNHSLPSMFPGGSTPPLSPRSASSSPRMVKQRFGPSSLGSPLK
LVCEPAREAIPQFYFTTGRPAPNATTEDFLSKVNQFFLSRSDGVQIKEFKSVTKEICKLP
SYLSTTLFRKIDANCSGKVSREQFINYWITSNMLTMDLATQVFTILKEPERNYLVQDDFK
PALQELLATHPGLEFLQSTPEFQERYAETVIYRIFYYINRSSNGRITLRELKRGNLIAAM
QHVDKEEDINKVLKYFSYEHFYVIYCKFWELDNDHDFFIEKENVIKYGNHALTYRIVDRI
FSQVPRKFTCNVEGRMGYEDFVFFILAEEDKSSEPSLEYWFKCIDLDGNGVLTRKEMHYF
FEEQLHRMECMAQEPVLFEDILCQIFDMIGPENEECITLRDIKNCKLAGHVFNILFNLNK
FVAFESRDPFLIRQEHEDPTLTEWDRFAHREYIRLSMEEEAEDASNASDAWDESLEAPF
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggatatggacgctggaggtgacttggagttcccgctggtcctggagatgttgcagctc
cccgaggtatcttattttgctctgaaatccaatccttatgtcgttgaggcgctgttttcg
cagtggctttcgcttcccgggactggccgactggtgaattctttgattactgatgcgaag
tccggtgcttctttgaatgttggcgggaactctactggaatcgatggtgtttctaatcat
tctctaccttccatgtttcccggtggcagtacacctccactttcaccacgcagtgcatcc
agttccccacggatggtgaaacagaggtttggaccgtcttcgctaggctctccacttaag
ttggtctgtgagccagcaagagaggctataccacagttttattttacaactggtcgtcca
gcaccgaatgccacgacagaagattttctatctaaagtgaatcaattttttctgtctcgt
tcggatggagtgcaaataaaggagtttaaatcagtcacgaaggagatctgcaagttacct
tcatatctctccactactctttttaggaagattgacgctaactgcagcggaaaagtatcg
agagaacagttcatcaattattggattacgagcaatatgttaactatggatttagcaact
caagtatttactattctcaaggagccagagcgaaattaccttgttcaggatgatttcaaa
cctgccttacaagaacttttggcaactcatccggggttggaatttttgcaaagtacacca
gaattccaggaaagatatgctgaaacagtcatatacaggatattttactatattaacaga
tccagtaacggtcgtattaccctcagggagttgaagcgtggcaacttaattgctgcaatg
cagcatgtggacaaggaagaagatatcaacaaagtcctgaagtacttctcatacgaacac
ttctatgtcatatattgcaaattttgggagcttgacaatgatcatgatttttttatcgag
aaagagaatgttatcaaatatggtaaccatgctttaacatatcggattgtcgatagaatc
ttttctcaggttccaagaaaatttacttgtaacgttgaagggaggatggggtatgaagac
tttgtgttcttcattttggctgaagaggataaatcatctgaacctagcctcgagtactgg
tttaaatgcattgatctagacggaaatggagtgctcacaaggaaagaaatgcactatttt
tttgaagagcagttgcaccgaatggagtgtatggctcaggaaccagtgctttttgaggac
atattgtgccagatttttgatatgatcggaccagagaatgaggaatgcataactttgcga
gatattaaaaactgcaaacttgctggacatgttttcaacatccttttcaatctcaacaag
ttcgttgcttttgaaagtcgtgatccattcctaatccgtcaggaacatgaggatccaact
ttgacggaatgggatcgatttgcacatagagaatatattcgtctttccatggaagaagaa
gctgaagatgcttcaaatgcaagtgatgcctgggatgagtcacttgaggctcctttttga
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