Cucurbita pepo subsp. pepo (vegetable marrow): 111806851
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Entry
111806851 CDS
T05351
Name
(RefSeq) chaperonin CPN60-like 2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111806851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpep03019
]
111806851
03110 Chaperones and folding catalysts [BR:
cpep03110
]
111806851
03029 Mitochondrial biogenesis [BR:
cpep03029
]
111806851
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpep04147
]
111806851
Enzymes [BR:
cpep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
111806851
Messenger RNA biogenesis [BR:
cpep03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
111806851
Chaperones and folding catalysts [BR:
cpep03110
]
Heat shock proteins
HSP60 / Chaperonin
111806851
Mitochondrial biogenesis [BR:
cpep03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
111806851
Exosome [BR:
cpep04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111806851
Exosomal proteins of other body fluids (saliva and urine)
111806851
Exosomal proteins of breast cancer cells
111806851
Exosomal proteins of colorectal cancer cells
111806851
Exosomal proteins of bladder cancer cells
111806851
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
LEA_2
Motif
Other DBs
NCBI-GeneID:
111806851
NCBI-ProteinID:
XP_023548119
LinkDB
All DBs
Position
LG12:complement(6113836..6121283)
Genome browser
AA seq
843 aa
AA seq
DB search
MADRVHPNAAGKKASANANSNSDDNINPTANAPPFPSTKSQLYGASRPTFRPQPHNRRRS
TCCSICIWLTAIIVTVIVLIAVASTVVYLIYRPHRPSFSVTALKIDSFKFTPNSQLNSKF
DLNLAATNPNKKVKFIYSPISVAISSNGVDLGDGSFPEFVHEKRNITAMKVTAISSGGEI
EGEPVDSLKAAIKSKAGLPLEIKVETKVKVKMGWLKMPKVGLRVLCDGITAGVPMAKKKT
AVAAAVDNAECKEPKAEGVSLSLSIWTLWPLPAMYRVVSRLASSTSRKLVCSRVTSSRSY
AAKDINFGNGARAAMLQGVSEIAEAVKVTMGPKGRNVIIDKSHGSPKVTKDGVTVAKSIQ
FKDKAKNVGADLVKQVASATNTAAGDGTTCATVLTQAILTEGCKSIAAGVSVMDLRIGIK
TAVDAVISELKSKALMISTPEEITQVATISANGEREIGELIARAMEKVGREGVITVSDGN
TLEDELEVVEGMKLGRGFISPYFINDQKTQKCDLENPLILIHEKKISDMNLILRVLELAV
EKKRSLLVVAEDVESDALAMLILNKHHAGLKVCAIKAPGFGDNRKANLDDLAILTGGEVI
TDERGLTLDKVQVEMLGTAKKVTVSLDDTIILHGGGDKKLIEERCEQLRTTIDRSTAMFD
KEKAQERLSKLSGGVAVFKVGGVSEAEVGERKDRVTDAVNATRAAVEEGIVPGGGAALLH
ATKVLDDLQAQNADQKRGIEIVQHALRAPTFTIVSNAGYDGALVLGKLLEQDDRNLGYDA
AKGVYVDMVKAGIVDPLKVVRTALVDAASISMLLTTAEAAIVEDPNDKNKLPSRMPAMDD
MGY
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggcggacagagtccacccgaacgccgccggtaagaaagccagtgccaatgccaattcc
aattccgacgacaatattaacccgacggccaacgcgccgcccttcccatccaccaaatcc
caactctacggcgcttcccgccccaccttccgtcctcagcctcacaatcgccgccgctcc
acttgttgctcaatctgcatctggctgacagcgatcatcgtcaccgtaatcgtcctcatc
gccgttgcctccaccgtcgtatacctaatttaccgtccacaccgcccgtccttctctgtc
acagctctcaaaatcgattccttcaaatttacgcccaattctcaactcaattccaaattc
gacctaaatctcgccgctacaaaccctaacaagaaagtcaagttcatttacagtccaatt
tccgtcgccatctcgtcgaacggcgtcgatctcggcgacggatcgttccctgagttcgtg
cacgagaagagaaacatcacggcgatgaaggtgacagcgataagcagtggtggagagatc
gaaggcgagccggtcgattcattgaaggcggcgattaagagcaaagccggattgccgttg
gagattaaggtggagacgaaagtgaaggtgaaaatgggatggttgaaaatgccgaaggtt
ggacttagagttctttgcgacggaattacggcgggcgttccgatggcgaagaagaagacg
gcggttgctgcggcggtggataatgcagagtgtaaggagccgaaagcggaaggggtctct
ctctctctctctatctggactctgtggccattaccggcgatgtatcgagtagtttccaga
ttagcttcctcaacgtcgagaaaactcgtatgtagcagggtaacgagcagcagaagttat
gcggcgaaggatatcaattttgggaatggggctcgtgcagctatgctccaaggtgtctca
gagattgctgaagcggttaaagtgacaatgggaccaaagggtcgcaatgtaattattgat
aaaagtcacggcagcccgaaagtcacaaaggatggcgttactgtagccaaaagtatccaa
ttcaaggacaaggctaaaaatgttggggcagatctagtaaagcaagttgcgagtgccaca
aacactgccgctggagatggtacaacttgtgcaactgttctgactcaggccattctcacc
gaaggttgcaagtcaatagctgcaggtgttagtgtgatggatttacgcattggtatcaaa
acagcagttgatgctgttatctctgagttgaaaagcaaagcattgatgataagtacccca
gaagaaattactcaggttgccactatttctgcaaatggtgaacgtgagattggagaattg
atagcaagggcaatggagaaagttggaagggaaggagtgattactgtttctgatggaaat
actctggaggatgaactggaagtggtggaaggaatgaagctaggcaggggttttatttct
ccttattttattaacgatcaaaagacccagaagtgtgacctagaaaaccctctcatcctc
atacatgaaaagaagatttcagatatgaatttaatcctcagagtacttgaacttgcagta
gagaagaagaggtcactccttgttgtagctgaggatgttgagagtgatgcacttgccatg
ctaatacttaacaagcatcatgctggcttgaaggtttgtgccatcaaagctcctggtttt
ggggacaacagaaaagcaaatttggacgatcttgctattctgacgggaggagaggtaatc
accgatgaacgtggtttaactcttgacaaagtgcaagtagagatgcttggtactgcaaaa
aaggttactgtctctcttgatgatacaatcattcttcacggaggtggtgacaagaaacta
attgaagaaagatgtgagcagttgaggacaaccattgacaggagtactgcaatgtttgac
aaggaaaaagctcaggaaagattgtcaaaactctctggtggtgtagcagtcttcaaggta
ggtggggtaagcgaggcagaagttggggagaggaaagacagagtcacagatgccgtgaat
gccacaagagcagctgtggaggaaggaattgtgccaggtggtggagctgcccttttgcat
gctacgaaggttctggatgatctccaagctcaaaatgccgaccagaaaagaggaatagaa
atagtgcaacacgctctcagggcacccacatttacaatagtctcaaatgctggatatgat
ggagctttggttcttggaaaattactcgaacaggatgatcgtaacttgggttatgacgct
gcaaaaggtgtatatgttgacatggtgaaggctggaattgtagatcctctgaaagttgtg
agaactgctttagtggatgctgccagcatctcaatgctgttgacaacagccgaggcagct
atagtggaagatccaaatgataagaacaagcttccaagtagaatgccagcaatggatgac
atgggctactag
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