Cucurbita pepo subsp. pepo (vegetable marrow): 111807121
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Entry
111807121 CDS
T05351
Name
(RefSeq) protein SLOW WALKER 1-like
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111807121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpep03009
]
111807121
Ribosome biogenesis [BR:
cpep03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
111807121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WD40_Prp19
WD40_CDC20-Fz
WD40
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
EIF3I
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_SCAP
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
111807121
NCBI-ProteinID:
XP_023548467
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Position
LG12:complement(8265365..8267830)
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AA seq
527 aa
AA seq
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MGEPNSLSLTRTFLVKPKLKAKARTPKETPESKYWSSFKRHEIPNLVSSISSVSFCPTNP
SIFSASHSTSLTLFSTETMAPTSAITSFRDVVSCASFRCDGLLIAASDLSGLVQVFDVKS
RTPLRKLRSHLRPVHFVQYPVLDKLHLVSGGDDAVVKYWDVASQTPLLDFLGHKDYVRSG
ACSPSSMDMFVTGSYDHTVKLWDARTNSKSVLEVNHGKPVEDVIFLPSGGLVATAGGNSV
KIWDVIGGGKMVGSMESHNKTVTSLCVGKLGKDSGEESDQFRILSVALDGYMKVFDYSKM
KVTHSMRFPTPLMSVGFSPDCSSRVIGTSNGILYAGKRKTKGITSSNLSNPWSLGSVGEP
QRRALRPSHFRYFHRGQGEKPTEGDYLVMKPKKVKLTEHDKLLKKFRHKDALVSVLASKN
PENVVAVMEELVARKKLLKCVSNLNTEELGLLLVFLQKHSTLPRYSSLLMGLTRKVLELR
AEDIRASGALKDHIRNLKRSVDEEIRIQQSLLEIQGIISPLLRIAGR
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgggagaacctaattctttgagtttaacaaggaccttcctggttaaaccaaagcttaaa
gctaaagccaggacacccaaagaaactccagaatcaaaatattggtcctcctttaagcgt
catgagatcccgaaccttgtttcatccatatcctctgtttccttctgtccgacgaatcct
tccattttctctgctagccactcgacctctctgactctttttagcacggaaaccatggcc
cctacctctgcaattacatcttttcgagatgttgtatcttgtgcttcgtttcgttgtgat
ggcctcctcattgctgcctcagacctttcagggcttgtccaagtctttgatgttaaatct
cgaaccccgcttcgaaagcttcgttcccatttgcgcccagttcattttgtccagtacccg
gttctcgataagctccacctagtatctggtggggatgatgcagttgttaagtattgggat
gtggcgagtcagactccgcttttggattttttgggccataaggactatgttagaagtgga
gcatgctctccatctagcatggacatgtttgtcactgggtcgtatgatcacactgtgaag
ctttgggatgctagaacgaattcaaaatcggttctggaagtaaatcacgggaaaccggtg
gaggatgtgattttcttaccgtcaggtggactagttgctactgctgggggtaattctgtg
aaaatttgggatgtgattggaggtgggaagatggtgggctctatggagagtcataataag
actgttacttcactatgtgttgggaaattgggcaaggatagcggagaagaatcagatcaa
tttagaatcttgagtgtagctctggatgggtatatgaaggtgtttgattattcaaaaatg
aaagttactcattcaatgagattcccaacacctcttatgtcagttgggttttctcctgac
tgtagtagtagagttatagggacttcaaatgggatcttgtatgctggcaagaggaagact
aagggaattacgtcgagtaatttgtcgaacccttggagtctcggatcagttggggaacct
caaaggcgagccttgaggccttctcactttcgatactttcatcgtggtcaaggggagaag
ccaactgaaggagattacctagtcatgaaacccaaaaaggtgaagttgacagagcacgat
aaactcttgaagaagttcaggcacaaggatgctctagtatcggtgttagcgagtaagaac
ccggagaatgtggtggctgtaatggaggaattggtagcaagaaagaagctgttgaaatgc
gtttcgaatttgaacacggaggagcttggtttgctattggttttcttacaaaagcactct
acattgccaagatactcaagcttgttgatggggttgacacgaaaggttctagagctacgg
gccgaagatattagagcctcgggtgccttgaaagatcacatcagaaacttaaagcgatcg
gtagacgaagagattcggatacaacagtcattgctggagatacaaggtatcatttcacca
ttactgagaattgctggaagatga
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