Cucurbita pepo subsp. pepo (vegetable marrow): 111807158
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Entry
111807158 CDS
T05351
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
111807158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpep04121
]
111807158
Ubiquitin system [BR:
cpep04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
111807158
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
F-box
LRR_At1g61320_AtMIF1
LRR_8
Motif
Other DBs
NCBI-GeneID:
111807158
NCBI-ProteinID:
XP_023548515
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Position
LG12:complement(8181429..8184738)
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AA seq
584 aa
AA seq
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MLKMVSAFPEDVLEHVFSFIQCHKDRNSISMVCKSWYEIERRCRKRVFVGNCYAVSPRIV
TRRFPKVRSVELKGKPHFADFSLVPDGWGGYVYPWIVAMASAYPFLEEIKLKRMVVTDES
LELISKSFKNFKVLVLMTCEGFSTDGLAAIAANCRNLEVLDLRESDVEDLNGHWLSHFPE
TYTSLVSLNFACLGSEVSISALERLVDRCPNLQTLRLNRPVPLDRHASLLRRAPQLVEFG
AGCYTADLRSEVFSNLTGAFTSCTELKSLSGFWDVVPAYLPSVYPTCSRLTSLNLSYAII
QCDDLTKLITQCHNLQKLWVLDYIEDSGLEALAGICKDLRELRVFPSEPYGPEPNVSLTE
QGLVSVSEGCPKLQSVLYFCRQMTNAALVTIARNRPNMTRFRLCIMEPRTPDYITNQPLD
VGFGAIVEYCKDLQRFSLSGLLTDRCFEYIGTYGKKLEMLSVAFAGNSDLGLHHVLSGCD
SLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSFGACKLLAQKFPQLNVEVIDER
GPPNTRPESCPVERLYIYRSVAGRRSDMPGFVWTIDGDAPLRLT
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaatggtgagcgcgtttccagaggatgtgttggagcatgtgttttcgtttata
cagtgtcataaggacaggaactcgatctccatggtgtgcaagtcgtggtatgagattgag
agacggtgtaggaagagggtttttgttgggaactgctatgcggtgagtcctcggattgtg
accaggaggtttccgaaggtgagatctgtggagctcaaggggaaaccgcactttgcggac
tttagtttggtgcctgatggttggggtgggtatgtttatccgtggatcgttgctatggct
tctgcttatccttttctggaggagatcaagttgaagagaatggtggttacggatgagagt
ttggagctcatttccaagtcttttaagaattttaaggttcttgtgttaatgacatgcgag
gggttcagtacggatgggcttgcggccattgctgccaattgcaggaatttggaagtattg
gacttacgagagagtgatgtggaagatctaaatgggcactggctcagccattttcctgaa
acctatacctcactggtatccctcaattttgcttgtttggggtcagaggtgagtatttct
gccttggagcgtctcgtggataggtgtccaaacttacagacactgcgcctcaatcgtcca
gttccccttgatcggcatgccagtctacttcgtcgtgcacctcagctggttgagtttggc
gctggatgctacacagctgacttgagatcggaagttttttcgaacttaactggggcgttt
acaagctgtactgaattgaagagtctatcgggattttgggatgttgtccctgcatacctt
ccttccgtttatccaacttgctctaggctcacatccttgaacttgagctacgctataatt
caatgtgacgatcttaccaagcttatcactcagtgtcataatttgcagaagctttgggtg
ctggattacattgaagattctggccttgaggcccttgcaggtatctgcaaggatcttcga
gaattaagagtgtttccatccgaaccatatgggccggaaccgaatgtgtctttgacagaa
cagggtctcgtctctgtttctgaagggtgtccaaagctccaatctgttctgtacttctgt
cgtcaaatgacaaatgctgccttagtgaccattgccaggaatcgtccgaacatgacccgt
tttcgtctatgtattatggagccacgaactcccgattacatcacaaatcagccgcttgat
gtaggctttggtgccattgttgagtattgcaaagatctccagcgtttttccctttctggc
cttctgacagatcgatgttttgagtatataggaacttacggtaagaagctagagatgctg
tctgtggcatttgctggtaatagtgatttaggacttcatcatgtgttgtctggatgtgat
agtcttcgcaagctagagattagggactgtccttttggtgataaagctcttttggccaat
gctgcaaagctcgagacaatgcgatccctttggatgtcttcttgctctgtgagttttgga
gcatgcaaattgttagctcaaaagtttccccaactcaatgtcgaagttatagacgagagg
ggtcccccaaatacaaggcctgaaagttgccctgttgagagactttacatataccggagt
gtcgccgggcgtcggtctgatatgcccggtttcgtatggacaatcgacggagatgctcct
ctaaggcttacttga
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