Cucurbita pepo subsp. pepo (vegetable marrow): 111807180
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Entry
111807180 CDS
T05351
Name
(RefSeq) F-box/LRR-repeat protein 4-like isoform X1
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpep04121
]
111807180
Ubiquitin system [BR:
cpep04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
111807180
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GFIT
Motif
Pfam:
DUF7885
LRR_At5g56370
LRR_6
LRR_At1g61320_AtMIF1
LRR_4
F-box-like
Motif
Other DBs
NCBI-GeneID:
111807180
NCBI-ProteinID:
XP_023548543
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Position
LG12:6968953..6976064
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AA seq
581 aa
AA seq
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MEENFPYLPEECWEMIFSFLLQRRHSHHFESLSLVCKQFLSITNTLRTTLRISELTIPAM
SRIFSRFRQLKRIDLRNFKGVPDDLLIRIAGSGLDIESLDITNQARFPVSGMNFLGSTMR
NLRVLLCSKLGVLTDDDLVEIAKLFPNLEDLDISYPMNPLAPSCYSDITDSGIFALIQGL
PRLRKVNLSGNSLVTDKSLIDLSTKCVWLREIAICDCDLITQSGIAKALRQNPNLSSLSA
NWIGIPSLNSDLIDSFLSMKNLNSIDLSESIISDQLLNSLANSCSPLKKLVLSHCHDFSF
SGISFLLNKNPLIEWLDLEAANFLTDESVKELSEFLPLVKLINLSNCSNLSCSSLFILAR
NCPALTDIEMKIVNLQKEEGHPKDFVNPKLISLDLSGNKNLCNDGVGKIASIFPNLELLK
MNHCAAITDEGIGDVLTACPKIRHLEVNYCTGIKNLVMNCELPSMEALKLQRLGIEDSTL
AMIGSRCPSLIHLDLLGCLKVTAEGVKEVVRNCRGLREISLWDCCEIDCSVIPWMVFSRR
SLREIIPPNFIFPTANQRSLFLRHGCLVHADGFSLDLKGLS
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggaagagaatttcccatatttgccggaagaatgctgggaaatgatcttcagtttcctc
ctccaacgccgtcacagccaccatttcgaatccctatctctggtctgcaaacaattctta
tccatcaccaacacgcttcgcactaccctcagaatctccgaattaactattccggcgatg
tcccggatattctctagattccggcaactcaaacggattgatcttagaaatttcaagggc
gtacctgatgacttgctcattaggattgcgggatctggattggatattgaatcgctggat
atcactaatcaggcgagatttccggtttctggtatgaacttccttggctcgacaatgcgg
aatttgagggttttgctgtgctcgaagcttggggttctgactgacgacgatctggttgaa
atcgctaagttgtttccgaatcttgaagatctcgatattagctatcctatgaatcctctc
gctcccagttgttatagtgatattacggattcggggattttcgctttgattcagggcctg
ccgcgacttcgcaaggtaaatctctcaggaaattctctcgttactgataagtcgcttata
gatttatcaacgaaatgtgtgtggcttagggaaatagcaatttgtgattgcgatttgatc
actcaatcaggtattgccaaggccctgcgccagaaccctaatttgagttcactctccgca
aattggatagggattccctctctaaattcagatcttatcgattcgtttctttctatgaaa
aatctaaattctattgatctttcggagtcaattatttcggatcagttgctgaattcatta
gcaaattcatgttcgccattaaagaaactcgttctttcccattgccatgacttctcgttt
tctggaatttcgtttctattgaataaaaatcctctgattgaatggttggatcttgaagcc
gccaatttcttgactgatgaatctgtgaaagagttatcagaattcctcccgctagtgaaa
ttgataaacctcagcaattgctcaaatctgtcatgttcatccttgttcatcctggcaaga
aactgccctgctttaactgatatagaaatgaagattgtaaatctccagaaagaagaaggc
cacccaaaagattttgtcaaccctaaacttatatctctggatctatctgggaacaagaat
ttgtgcaatgatggtgtgggaaaaattgcttccatttttccaaatttggagctgttgaaa
atgaaccactgtgcagcaatcaccgatgaaggcattggagatgtcttaacggcatgcccc
aaaataaggcatttggaagtgaattattgtacgggaatcaagaatttggtgatgaactgt
gaacttccatcaatggaggcactgaaattacagagattaggtattgaggattcaacatta
gcaatgattggaagcagatgcccttctttgatccatttggacttgttgggatgcttgaaa
gtgacggcagaaggggtgaaggaggtggtgcgaaattgcagaggattgagggaaattagc
ttgtgggattgctgtgaaattgattgcagtgttattccatggatggttttctcgaggcga
tctctgagggagataattcctcccaattttatctttcctactgctaatcaaaggagcctt
ttcttgcgccatggatgtctggtccacgctgatgggttttcgctggatctaaagggcctc
tcgtag
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