Cucurbita pepo subsp. pepo (vegetable marrow): 111807275
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Entry
111807275 CDS
T05351
Name
(RefSeq) probable histone H2A variant 3
KO
K11251
histone H2A
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111807275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpep03036
]
111807275
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpep04147
]
111807275
Chromosome and associated proteins [BR:
cpep03036
]
Eukaryotic type
Nucleosome assembly factors
Histones
111807275
Exosome [BR:
cpep04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111807275
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone
Histone_H2A_C
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
111807275
NCBI-ProteinID:
XP_023548701
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Position
LG12:complement(6784692..6787809)
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AA seq
134 aa
AA seq
DB search
MSGKGAKGLIMGKSASNNKDKDKKKPVSRSSRAGLQFPVGRVHRQLKTRVAANGRVGATA
AVYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVI
PHIHKSLINKSSKE
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggaagggagccaagggtctgataatgggcaaatctgcctccaacaacaaggac
aaagataaaaagaaacctgtctctcgctcttcccgcgctggtctccagtttccagtggga
agggttcaccggcaactaaagacaagggttgccgcaaatggacgagttggggctacagca
gccgtatacacagcagctatcttggagtacctgactgcagaggtgttggagctggccgga
aatgctagcaaggatctgaaggtgaagcgtataacaccaaggcatctgcagctcgcaata
agaggagatgaagaactggacacactcattaaaggaaccattgctggcggaggagtcatc
ccccacatccacaagtcactcattaacaaatcctccaaggaatag
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