Cucurbita pepo subsp. pepo (vegetable marrow): 111807520
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Entry
111807520 CDS
T05351
Name
(RefSeq) autophagy-related protein 8f-like
KO
K08341
GABA(A) receptor-associated protein
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
111807520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpep04131
]
111807520
04121 Ubiquitin system [BR:
cpep04121
]
111807520
03029 Mitochondrial biogenesis [BR:
cpep03029
]
111807520
Membrane trafficking [BR:
cpep04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
111807520
Ubiquitin system [BR:
cpep04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitin-like proteins (UBLs)
111807520
Mitochondrial biogenesis [BR:
cpep03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
111807520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG8
APG12
Motif
Other DBs
NCBI-GeneID:
111807520
NCBI-ProteinID:
XP_023549034
LinkDB
All DBs
Position
LG12:2987192..2991045
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AA seq
117 aa
AA seq
DB search
MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ
FVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERKDEDGFLYVTYSGENTFG
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgagctcgttcaagcaagagcatgattttgaaaagagacacgctgaggctgcc
cggattagagagaagtacccagacagaattccagtaattgtggagaaggcagagagaagt
gatattcccaacattgacaaaaaaaagtatttagtgcctgctgacctgactgttggtcaa
ttcgtttatgttatccggaagagaataaaactgagtgcagaaaaagcaattttcatattc
gtggacaatgtgctaccgccaacagggtctctcatgtctgcaatctacgatgagaggaag
gatgaggatggctttctctatgttacgtacagtggagagaacacatttgggtga
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