KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111807575
Entry
111807575         CDS       T05351                                 
Name
(RefSeq) proliferating cell nuclear antigen-like
  KO
K04802  proliferating cell nuclear antigen
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03030  DNA replication
cpep03410  Base excision repair
cpep03420  Nucleotide excision repair
cpep03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    111807575
   03410 Base excision repair
    111807575
   03420 Nucleotide excision repair
    111807575
   03430 Mismatch repair
    111807575
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cpep03032]
    111807575
   03400 DNA repair and recombination proteins [BR:cpep03400]
    111807575
DNA replication proteins [BR:cpep03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    111807575
DNA repair and recombination proteins [BR:cpep03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     111807575
   MMR (mismatch excision repair)
    Other MMR factors
     111807575
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    111807575
SSDB
Motif
Pfam: PCNA_N PCNA_C Rad1 Rad9
Other DBs
NCBI-GeneID: 111807575
NCBI-ProteinID: XP_023549127
LinkDB
Position
LG01:850154..852169
AA seq 329 aa
MLELRLLQGGLLKKVLEAMKDLVNDANFDCSPTGFSLQAMDSSHVALVSLLLRSEGFEHY
RCDRNVSMGMNLNNMAKMLRCAGNDDIVTLKADDGSDCITFMFENPSQDKIADFEMKLMD
IDSEHLGIPDAEYQSIVRMPAAEFARICRDLSTIGDTVLISVSKEGVQFSTRGDMGTANI
VCRRNTTVDKPEEDVIIEMEEPVSLTFVLRYLNSFTKATPLATQVTISMSSDLPMVIEYR
IEGMGYIRYYLAPKIDEEEEEAAAEAIRRPEIEPKNTEKAKPKADLKPKVKPKPESEMKI
DEDNESVNEFNAEEETNTPKEPKIETMEL
NT seq 990 nt   +upstreamnt  +downstreamnt
atgttggagctccgtctactccaagggggtcttctgaagaaggttcttgaagccatgaag
gatctcgtcaacgacgccaattttgattgttcccctactggtttctctctccaagccatg
gattctagtcacgttgctttggtctctctccttctccgctcagagggtttcgagcactat
cgctgcgatcgcaacgtctccatgggtatgaacctcaacaatatggctaagatgcttcgc
tgcgctggcaacgacgacatcgttacgctcaaggccgatgatggtagcgattgcatcacc
ttcatgttcgaaaacccttcgcaagataagatagctgattttgagatgaagttgatggac
attgatagcgagcatctcggaatccctgatgccgaatatcagtcaattgttagaatgcca
gcagctgagtttgcgaggatttgcagggatctcagcaccattggcgatactgttctgatc
tctgtgtccaaggaaggagttcaattctcaaccagaggagatatgggcactgccaatatc
gtttgcagacgaaataccacagttgataagcctgaagaagatgtcataatagagatggaa
gaaccagttagcttaaccttcgtcctgaggtacctcaactctttcacaaaggcaacccct
ctggcaactcaggtgaccattagcatgtcttcagacctacctatggtgattgaatacaga
attgaaggtatgggttatataagatactacttggctcctaagatcgatgaagaagaagaa
gaagctgcagctgaagcgattcgcagacctgagatagagcccaagaatacagaaaaagca
aaacctaaagcagatttgaagccaaaggtcaagcctaaacctgaatcagagatgaagatt
gacgaggacaatgagtctgtaaatgaattcaatgctgaagaggaaactaatactcccaag
gaaccgaagattgaaacgatggaactttga

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