KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111807644
Entry
111807644         CDS       T05351                                 
Name
(RefSeq) ESCRT-related protein CHMP1B-like
  KO
K12197  charged multivesicular body protein 1
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03272  Virion - Hepatitis viruses
cpep04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    111807644
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    111807644
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cpep04131]
    111807644
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cpep04147]
    111807644
Membrane trafficking [BR:cpep04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    111807644
Exosome [BR:cpep04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   111807644
  Exosomal proteins of other body fluids (saliva and urine)
   111807644
  Exosomal proteins of colorectal cancer cells
   111807644
SSDB
Motif
Pfam: Snf7 Ist1 Ham1p_like
Other DBs
NCBI-GeneID: 111807644
NCBI-ProteinID: XP_023549216
LinkDB
Position
LG12:6227561..6228505
AA seq 203 aa
MGNTEKLLNQIMELKFTSKSLQRQARKCEKEEKAEKLKIKKAMEKGNVDGARIYAENAIR
KRTEQMNYLRLSSRLDAVVARLDTQAKMSTINKSMASIVKSLESSLATGNLQKMSENMDQ
FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPASHAMP
TKETEKVDEDDLTRRLAELKARG
NT seq 612 nt   +upstreamnt  +downstreamnt
atgggaaacaccgagaaattgttgaatcagatcatggaattgaaatttacttcgaagtcg
ctgcaacgccaagccaggaagtgcgagaaggaagagaaagctgagaaactcaagatcaag
aaggctatggagaaaggaaatgttgatggagctcgaatttacgcggagaacgcgatccgt
aaacgaacagaacagatgaactatctccgcctgtcttcgaggcttgatgctgttgtggct
cggctcgacacacaggctaagatgtccacgattaacaagtccatggcgtcgatcgttaag
tcgttggaatcttctttggcgactggaaatttgcagaagatgtccgaaaatatggaccaa
tttgagaagcagtttgtgaatatggaggttcaggccgagtttatggaaaatgcaatggcc
ggatctacgtcgctctcgactccggaaggagaagtcaacagcttgatgcagcaggtcgcg
gatgattacggtctggaagtctccgtcgggctaccgcagccggcttcacatgcaatgcca
acgaaggagaccgagaaagttgacgaggacgacttaacgaggcgccttgcagagctcaag
gccagaggttaa

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