Cucurbita pepo subsp. pepo (vegetable marrow): 111807651
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Entry
111807651 CDS
T05351
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase SPL2
KO
K15688
E3 ubiquitin-protein ligase MUL1 [EC:
2.3.2.27
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpep04121
]
111807651
Enzymes [BR:
cpep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111807651
Ubiquitin system [BR:
cpep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111807651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDE
zf-C3HC4_3
Prok-RING_4
zf-RING_2
zf-C3HC4
MTLN
RING_XB3-XBAT31
Zn-ribbon_GIR1
AmpE
FTR1
Motif
Other DBs
NCBI-GeneID:
111807651
NCBI-ProteinID:
XP_023549225
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All DBs
Position
LG12:5911112..5914984
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AA seq
407 aa
AA seq
DB search
MSSSEQALVSLLSQFALXFDGAVLGAALAYAAVRTVLKLTASCSALDELRKAPYVSVSDL
RHIISDGDSGQSESDHKLVVVRGTVEARSSVEGNWKSVQPNVLISQESGDRAVIIQRTQM
CIFNEWKGFFGWTSDLRAIFGRTFRKQESTSFRTVPFVLVDEGHSPYSDFVVVNMDGSRH
PLPLTTVYHQLQPVSATPYTFLQALFGHEYPVGVLDEEKILPLGKNISAVGICSFKNGVP
VIKSCKDFPHFLCEMTKDQMILDLVFKTKFLFWSSVVLGSLSVGVLGYSVVRNWNRWKQW
RQQRRLQDSGNDSTMSQLDSNDIPIYGDFGTASDNEEAADPEDEVSSNVPDGQLCVICLM
RRKRSAFIPCGHFVCCERCAMSVERDSAPKCPVCRQQIRSSVRIYDS
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcatcggagcaagccctcgtttctctactctctcagtttgctttatagtttgat
ggagccgttttgggcgcagccctagcttatgctgctgttcgtaccgtcctcaaactcact
gcttcttgctccgctctcgatgagctccgtaaagctccttatgttagtgtttctgatctt
cgccatatcatttccgatggagattcgggacaatccgagtccgatcataagcttgttgta
gttcgtggcaccgtggaggccaggtcgtctgtggaaggtaattggaagagcgtacagcct
aatgtattgatttctcaagagtccggagatagagcggtgattattcagcgtactcaaatg
tgcatattcaacgaatggaaaggcttctttggatggacttctgatttacgtgcaattttt
ggaagaacctttagaaagcaagagtcgacatcatttagaacggttccttttgtccttgtt
gatgagggccattcaccatattctgattttgttgtcgttaacatggatgggtcaagacat
cctttgcctcttacaactgtgtatcatcaactacagcccgtttcggctactccttatacc
ttccttcaagcactttttggtcatgagtaccctgttggggtgcttgatgaggagaaaata
cttccattaggaaaaaatatcagtgctgttggcatatgcagttttaaaaatggagttcct
gtgataaagtcatgcaaggattttccccattttttatgtgaaatgaccaaggatcagatg
attttagatctagtcttcaaaacaaaatttctgttctggagtagtgttgtacttggttcg
ctgtcggttggcgttcttggttattctgttgtgagaaactggaatagatggaaacaatgg
aggcaacagagacggttacaggattcagggaatgattccaccatgtcacaactggattca
aacgacattccgatttatggtgattttggaactgcatcagacaacgaggaagcagccgat
ccagaggacgaggtatcatcaaacgttccagatggacagttgtgcgtgatttgtctcatg
agaagaaagcgatctgctttcattccgtgtggtcattttgtttgctgcgaacgttgtgcc
atgtcagttgaacgcgattcagctcccaaatgccccgtctgccgccagcagatccgtagt
tctgtgcggatttacgattcatga
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