Cucurbita pepo subsp. pepo (vegetable marrow): 111807664
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Entry
111807664 CDS
T05351
Name
(RefSeq) SWR1-complex protein 4-like isoform X1
KO
K11324
DNA methyltransferase 1-associated protein 1
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111807664
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpep03036
]
111807664
Chromosome and associated proteins [BR:
cpep03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
111807664
NuA4 complex
111807664
Chromatin remodeling factors
SRCAP complex
111807664
SWR1 complex
111807664
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SANT_DAMP1_like
DMAP1
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
PRC2_HTH_1
CAF1-p150_C2
Motif
Other DBs
NCBI-GeneID:
111807664
NCBI-ProteinID:
XP_023549249
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Position
LG12:7653551..7659081
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AA seq
444 aa
AA seq
DB search
MDAKDILGLPKNTLPLSQEKKPRAQKDAQRKRDGISREVYALTGGLAPIMPAIDTSELKK
RPPSDEKITWQWLPFSNSARKDNLQLYHWVRVVNGIPPTGDYSFAKYNKSVEVVKYTDEE
YEKFLKDPSWTKEETDQLFDLCERFDLRFVVIADRFPSTRTVEELKERYYHASKAILGAR
GPTSREGSGNTPAKDPFNVSQEIERKRALSMVLSQTKQKERKDAEVLAEAKKIIESRKAE
RVAEESKLAVTSNAVPEVTERAVVPGESVPSVSNVQPPPPAAVPSTVVADNASTLASLRM
LPVYLRTYALEQMVHAASSSAGLRTIKRVEQTLQDLSVNLKPRVPTKAVCAEHLELRKEI
LTLLNLQKQLQNKEAEGSSFRESPYSEAPGTPKDRAFIADSMSFGGERFVKRDQKRKATG
RLSEAPSSPAQSNKRPRKQKGSDL
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggatgccaaggatatcttggggttgcccaaaaacacgctgcctttgtcccaagagaag
aagcctagggctcagaaagatgcccagagaaagcgagatggaatttctcgggaggtttat
gcgcttactggtggtcttgcgcctattatgccggcgatcgatacatccgagctgaagaag
cgacctccatcagatgagaagattacatggcaatggcttcctttttcaaactctgctaga
aaggataatttgcagctttaccactgggttcgagttgtaaatggcattccaccaacaggt
gactattcctttgcaaagtacaacaagtctgttgaagttgtcaaatacacagatgaggag
tacgagaagtttttaaaagacccttcatggacaaaggaggagacagatcaattattcgac
ttgtgcgaaaggttcgatcttcgctttgttgtgatagctgacaggtttccatcaacaaga
acagtggaggaactgaaggagcgatattatcatgcatcaaaagcaattttgggtgctaga
ggaccaacatctcgggagggttcggggaatactcctgccaaggatcctttcaatgtctca
caagagatcgagcgcaaacgggcattgtccatggttctctctcaaacaaaacagaaagaa
cgaaaagatgcagaggttcttgctgaagcaaaaaagataatcgaatcacgcaaagctgaa
agagtggctgaagaatctaagttggctgtcacttcaaatgctgtcccagaagttactgaa
agggccgttgttcctggagagtcggtaccatctgtatccaatgtgcagcctccacctcca
gcagctgtaccttcaactgtagtagcagataatgcttctactctagcttctcttcgcatg
cttcctgtatacttgagaacatatgcacttgagcaaatggtacatgctgcaagctcatct
gccggccttaggactatcaaacgggtcgaacagaccctacaagatctttcggttaatcta
aaacccagggttccaacaaaagccgtgtgtgcagagcatcttgaattaagaaaagaaata
ttgacactgctgaatcttcaaaagcagttgcaaaataaggaggcagaaggttcttctttc
cgtgagagtccatacagcgaggcacctggcacacccaaggatcgcgcttttattgctgat
tctatgagttttggaggggaaaggtttgttaaacgggatcaaaaacgaaaggccactgga
agattatctgaagctccatcatcacctgctcaatctaataaaaggccaagaaaacagaag
ggatccgatctgtga
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