Cucurbita pepo subsp. pepo (vegetable marrow): 111807671
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Entry
111807671 CDS
T05351
Name
(RefSeq) structural maintenance of chromosomes protein 1-like isoform X1
KO
K06636
structural maintenance of chromosome 1
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpep03036
]
111807671
Chromosome and associated proteins [BR:
cpep03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
111807671
Meiosis-specific proteins
Cohesin complex and associated proteins
111807671
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_29
Laminin_II
ABC_tran
SepSecS
Laminin_I
AAA_27
BST2
DUF5713
SbcC_Walker_B
DUF1664
Motif
Other DBs
NCBI-GeneID:
111807671
NCBI-ProteinID:
XP_023549257
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Position
LG12:9247651..9261465
Genome browser
AA seq
1218 aa
AA seq
DB search
MPSLISSGKILRLELENFKSYKGHQIIGPFYDFTAIIGPNGAGKSNLMDAISFVLGVRTG
QLRGAQLKDLIYAYDDREKEQKGRRAFVRLVYQMGNGSELQFTRTITSTGGSEYRIDGKS
VSWDEYNSKLRSLGILVKARNFLVFQGDVESIASKNPKELTGLLEQISGSDDLKREFEEY
EEKKAKAEENSALVYQKKKTIVMERKQKKEQKEEAEKHLRLQDQLRSLKKDRFLWQLFVI
EKDVVKLNEELEAERRNRDDVMQQIDGFEHEALKKRKEQAKYLKEIGNCEKRIAEGSNKL
DKNQPELLKLKEETSRINSKIKRSRKELDKKIEQRRKHAQYIKELQKGIQDLNAKLDDLH
EKGRDSGEKLKLDDQELREYCRIKEEAGMKTAKLRDEKEVLDRQQHADIEAQKNLEENLQ
QLHNRENELESQEEQMRTRLRKILDSSARYKDDLADLKKDLHTMKDKHRDARNKYENLKS
KIGEVENQLRELKADRYENERDAKLSQAVETLKRLFQGVHGRMTDLCRPTQKKYNLAVTV
AMGKFMDAVVVEDEHTGKECIKYLKEQRLPPQTFIPLQSVRVKPVIERLRALGGSAKLVF
DVIHFNPALEKAIIFAVGNTLVCDDLDEAKALSWSGERHKVVTVDGILLTKSGTMTGGTS
GGMEARSNKWDDKKIEGLKKKKEQYESELDELGSIREMQLKESEASGRISGLEKKIQYAE
IEKRSIEDKLTNLRQEKEIIKEEIDRISPELQKLKNGIDKRNTEIRKLERRINEIVDRIY
RDFSKSVGVANIREYEENQLQAVQHMADERISLSSQLSKLKCQLEYEQNRDMESQIKELE
SSLSSLENALRKIQNKEADAKSTAENANNDIDRLKEELAEWKSRLEVCEKDMQEWKKKTS
AATTSISKLNRQINSKESSIEQLITQKQEIVEKCELENIDLPTISDPMETESLTPGPVFD
FSQLNRSYQQDKRSSDREKRELEFKHKIDSLVSEIDRTAPNLKALDQYEALKEKERVISE
EFEAARKEEKEVADKFNSIKQKRYELFMDAFNHISGNIDKIYKQLTKSNTHPLGGTAYLN
LENEDEPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFSIHSFRPSPFFILDEVD
AALDNLNVAKVAGFIRSKSCEGARMSQDTDGGSGFQSIVISLKDSFYDKAEALVGVYRDC
ERSCSRTLTFDLTKYRES
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccctgatttcgtccggcaagattctccgattggagctcgagaatttcaaatcc
tacaagggtcatcagataatcggtcctttttatgatttcactgctataattggtcccaat
ggagctgggaagtcgaacctcatggatgctataagcttcgtgcttggtgttcggactggg
caactgcgtggggcacagttgaaggacctaatctacgcttacgatgatagggagaaggaa
cagaagggacggagggcgttcgttcggcttgtttatcagatgggaaatgggtcggagctt
cagtttaccaggacaatcactagcacaggcggcagcgagtatcgaattgatggaaagagt
gtctcctgggatgagtataattcgaagctgaggtcacttggaatacttgtcaaggctcgg
aatttcctcgtcttccagggtgatgtagaatccattgcatccaagaatcccaaagaactt
actggacttcttgagcagatctcgggatctgatgatctcaagagagaatttgaggagtat
gaagagaagaaagccaaagctgaagaaaattcagcgcttgtatatcagaagaaaaagact
attgtgatggaaagaaagcagaagaaagagcaaaaggaagaagcagaaaagcatctccgc
ttgcaagatcaattgagatctttgaagaaagatcgcttcttgtggcaattatttgtaata
gaaaaggatgttgtaaaactcaacgaggaacttgaagctgaaagaagaaatcgtgatgat
gtcatgcaacaaattgatggttttgaacacgaagctttgaaaaagaggaaagaacaagct
aagtacttgaaagaaattggtaactgcgagaagagaattgcagagggaagtaataagctt
gataagaatcaacctgagcttctgaaattgaaagaagaaacatctcgaataaattcaaaa
atcaagagaagtcgaaaagaacttgataagaaaatagaacaaaggagaaaacatgctcaa
tatataaaggagttacaaaagggcattcaggatctcaatgcaaagcttgatgatttacat
gaaaaaggccgagacagtggtgaaaaactgaagttagatgaccaagagctgagggaatat
tgtcgaatcaaggaggaagctgggatgaagacagcaaaactaagagatgaaaaggaggtc
ttagataggcaacaacatgctgatattgaagctcagaagaacttggaagaaaaccttcaa
caattacataacagggagaatgaattggagtcacaagaggagcagatgcgaacaagactt
aggaagattcttgatagttcagctagatataaggatgatcttgctgatctgaaaaaggat
ttgcataccatgaaagataagcatcgagatgccaggaataaatatgaaaacctaaagtca
aaaattggagaagttgaaaaccaactgcgtgaattgaaagctgatagatatgaaaatgaa
agagatgctaaattatctcaagctgttgaaactttgaaacggctgtttcaaggagttcat
ggtcgcatgactgatctttgtcgtccaacacagaagaagtacaacctggctgttactgtt
gcaatgggtaagtttatggatgcagtggttgttgaggatgaacatacaggaaaagaatgt
attaagtatttgaaagaacaaaggcttcctcctcagacattcatacctcttcagtctgtt
cgtgtaaagcccgttattgagagattacgtgctttaggtggcagtgcgaagctggtgttt
gatgttatccattttaatccggcgttggagaaggcaattatatttgctgtgggaaatact
ctagtttgcgacgaccttgatgaagccaaggctctgagctggagtggagaaaggcataaa
gttgtaactgttgatggtattctgcttactaaatctggcacaatgactgggggtactagt
ggtggcatggaagcaaggtcaaacaaatgggatgataagaagattgaagggctgaagaaa
aagaaagaacagtatgaatcagagctagatgaacttggatcaatcagagagatgcaacta
aaggaatctgaagcatctgggaggattagtggacttgagaaaaagattcagtatgcggag
attgagaagcgaagtattgaagacaagcttacaaacttgaggcaagagaaagaaattatt
aaagaagaaattgatcgaataagtcctgaacttcagaagttaaaaaatgggattgataaa
agaaacacagaaattaggaagttggagaggagaatcaatgaaattgttgatcggatatat
cgagacttcagcaaatctgttggggtggcaaacatacgagaatatgaagaaaatcaactc
caagcagtgcagcatatggctgatgaacgtattagcttgagtagtcagctatcaaaattg
aaatgccagttggagtatgaacagaatcgggacatggaatcacaaattaaagaactggaa
tcttctttgagttcgttagagaatgctttaagaaagattcaaaacaaagaggctgatgcc
aaatcaaccgctgaaaatgccaataatgatattgatcgcttgaaggaggaattggctgag
tggaaatccaggttggaagtgtgtgagaaggatatgcaggaatggaagaagaaaacatcc
gctgctacgactagcatatcaaaattgaatcgtcagattaattctaaggagtcgagtatt
gaacagctgatcacacagaagcaggaaatagtggaaaaatgtgaattagaaaatattgac
ctccccactatctcagaccccatggaaactgaatccttgactcctggaccagtttttgat
tttagccagctgaatagatcctatcaacaggataagagatcatctgatagagagaaacgt
gagctggagttcaaacataagatagattccttggtatcagaaattgacagaactgcacca
aatttgaaagcactagatcaatatgaagctttgaaagaaaaggaaagagtaatatctgag
gagttcgaagccgctaggaaagaggagaaagaggtggctgacaaattcaattctattaag
caaaaaaggtatgagttgtttatggatgctttcaaccatatttctggaaatatcgataag
atttataagcaattgacaaaaagtaacacacatcccttgggtggaacggcatatttgaac
ttggaaaatgaggatgaaccatttttacatggtatcaagtataccgctatgccaccaaca
aagcggtttcgtgacatggaacagttgtctggtggagaaaagactgtggcagcattagcg
ttgcttttttccattcatagttttcggccttcgccctttttcatattggatgaagtggat
gctgccttagacaacttgaacgttgcgaaggtcgctggcttcattcgttcgaagtcatgt
gaaggtgccaggatgagtcaagacacggatggaggcagtggttttcaaagtattgttata
tcactgaaggatagcttttatgacaaagctgaagctttagtaggggtttaccgtgattgc
gaaagaagctgctcgagaacgttgaccttcgacctaaccaaatatcgggaatcatag
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