Cucurbita pepo subsp. pepo (vegetable marrow): 111807700
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Entry
111807700 CDS
T05351
Name
(RefSeq) nuclear pore complex protein NUP107
KO
K14301
nuclear pore complex protein Nup107
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111807700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpep03019
]
111807700
03036 Chromosome and associated proteins [BR:
cpep03036
]
111807700
Messenger RNA biogenesis [BR:
cpep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111807700
Chromosome and associated proteins [BR:
cpep03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
111807700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
111807700
NCBI-ProteinID:
XP_023549300
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All DBs
Position
LG12:complement(5781712..5795614)
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AA seq
1061 aa
AA seq
DB search
MDEEMDVSPTYFDPEDLTIRERFRRYRKRPSSISPHKEVSFSPVSESRILYDGQSFYSPT
NATPLETFKEDAESLDGDSHAVSVASLGPDSVRYSLKACKHENDPLSNSGDTTYPFFASL
MDSSIQGLMSIPDLILRFESSCRNVSESIRYGSDIQHRFSEDKLVRQKAQFLVDEAASWS
LLWYLYGKATRETPKDLIVFPPTSHLEACQFVIEDHTAQLCLRIVEWLEGLASKALDLET
KIRGSHVGTYLPSSGVWHNTQRSLKKGTSNTNVIHHLDFDAPTREHAHQLADDKKQDESL
LEDVWTLLKAGRMKEACDLCRSAGQPWRAATLCPFGGFEHFPSIDALVRNGKNRILQAIE
LESGIGHQWRLWKWASYCASEKIAEVDGGKYEAAVYAAQCGNLKRVLPICTDWESACWAM
AKSWLDVQVDLELTRSQGKMDLFKSIMDTVDESPGQSGRNFQASDGPESWPLPVLSQQPR
QISALLQKLHSGDMVHENVNRGCKEQQRQIQMILMLGDIPRLLDLIWSWIAPSEDDQDAF
RPHGDPQMIRFGAHLVLVLRYLLAEEMKDIFREKIMNIGDLILHMYAMFLFSVQHEELVG
VYASQLASHRCINLFVHMMELRLNSSVQVKYKIFLSAIEYLPFSPDGDSRGSFEEIIESV
LSRSRETKIGSSDKLSDAVEQHRLQSLQKAMVVQWLCFTPPSTIANVKDVSTKLLLRALA
HSNILFREFALISMWRIPSIPNGAHKLLSLLAEPLRQNSETFSALEDNGVLENLKEFEDW
SEYFACDATYRNWLKIELENNEAPSLDLSLEEKQRSIVAANETLDSSFSLLLRKESPWLD
FTEDYVYESMEPLYIELHAVVMLCLPSGECLCPEAATCTTLTSALYSSVTEEIILNRKLV
VNVSIASGEGFCIKIVLRCLATPGDGLGHCEGNDGGILSGIMAAGFKGELRGFQAGVTLE
VLRLDAWCSNEDGSLECPAAYIVQGLCRRCCLPEVILRCMQVSVALMELGLEPKCHDQLI
ELVASSESGFSDLFSQQQFEEFLILEREYTLRKMELGEPSS
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagaaatggacgtctctcccacctactttgaccctgaagacctcacgattcga
gagcgatttcgtcggtacaggaaaaggccttcaagcatatctcctcacaaggaagtttca
ttttcaccagtcagtgagtctaggattttgtatgacggacagagtttctatagtccaaca
aatgccacacctctcgaaacttttaaagaagacgctgaaagtcttgatggcgatagccat
gcagtttcagtagcgtctctaggtcccgattcagttcgctactcactgaaggcttgcaag
catgagaatgacccattatctaatagtggagatacaacttaccccttttttgcatctctg
atggactcttcaatccaaggattgatgtctatcccagacttgatactaagatttgaaagt
tcttgtcgcaatgtttcagagtcaataaggtatggttctgacattcagcaccgcttttct
gaagacaaattggtgaggcagaaggctcaatttcttgtagatgaagctgcctcttggtcc
ctcttgtggtacctttatgggaaagcaacgagagagacgcctaaagatctaattgtgttt
cccccaacatcgcacttggaggcctgccagtttgtcattgaagaccatacagctcaatta
tgtcttcgaattgttgagtggctggaaggtttagcctctaaagcacttgatttggaaact
aagattcgtggatctcatgttggtacctatcttccatcttctggagtttggcataatact
cagcgttctctcaagaaagggacttctaacacaaatgttattcatcacttggattttgac
gctccaacacgtgagcatgctcatcagctggcagatgacaaaaaacaagatgaatctctt
ttagaagatgtctggactcttctaaaggctgggagaatgaaagaagcatgtgatctctgc
cggtcagcaggacagccgtggagagctgcaactttgtgtccttttggtggatttgaacac
tttccttccattgatgccttggtaaggaatggaaagaacagaattctacaagctattgag
cttgaaagtggcattggccaccaatggcgtctttggaaatgggcttcttattgtgcatct
gagaaaattgctgaagtagatggtgggaagtatgaggctgctgtatatgctgctcaatgt
ggaaacttgaagcgtgtacttcctatatgcacagattgggagtcagcatgctgggcaatg
gcaaagtcgtggctagatgttcaagtagatcttgaactcactcgttcacaagggaagatg
gatcttttcaaaagcattatggacactgtagatgaaagtccaggacaaagtggtagaaac
tttcaggcttctgatggaccagaaagttggccacttccagttctgagccaacaaccacgc
caaatttctgccctccttcaaaaactccattcaggcgacatggtgcatgaaaatgtaaat
cgtggatgcaaagagcagcagcggcaaattcagatgatcttgatgcttggagacattcct
cgtctcttggacctaatctggtcatggatagcaccttcagaagatgatcaagatgctttc
aggcctcatggagatcctcaaatgattcggtttggtgctcatttagtgctcgtgcttcga
tatttacttgctgaagaaatgaaggatatcttcagagagaagatcatgaatattggcgat
cttattttacacatgtatgccatgtttctcttctcggtgcaacatgaggagctggttggt
gtatatgcttctcagctagcaagccatcgatgcatcaacctctttgtgcacatgatggaa
cttcggctcaacagcagcgtgcaagtcaagtataaaatctttctctctgctatagaatat
ttaccattttctcccgacggtgattcaaggggcagttttgaagagattattgagagtgta
ctatcaagatctcgggagacaaaaattggtagttctgacaagttatcagatgctgtagaa
caacaccgcctgcagagtcttcagaaagctatggttgtccagtggctctgctttacccct
ccttccacaattgctaatgtcaaagatgttagtactaaacttcttctccgagcattggca
catagcaatattctgttcagagaatttgctctgatatccatgtggagaattccatcaatt
cctaatggtgcacacaagttacttagtcttcttgctgagcctttgaggcagaattcagaa
acatttagtgcgttggaggataatggtgttctggagaacctaaaagagttcgaggattgg
agtgaatattttgcctgtgatgcaacatatcgcaactggctcaaaattgagttggagaat
aatgaagcgccttccctcgatctctcattggaagaaaaacaaagatccattgtagctgct
aatgagacactcgattcgtcgttttcattgttacttaggaaagaaagtccgtggttggat
ttcacagaagattacgtctatgagtcaatggaacctctttatattgaattgcatgccgtt
gtcatgctctgtttaccttcaggagaatgtttatgtcctgaagctgccacatgcacaacc
ttaacaagtgccctttactcctctgtaactgaagagatcatattaaatcggaaactagtg
gtgaatgtctccattgcatctggggaaggtttctgcattaagattgtgcttcgctgttta
gcaacaccaggtgatgggcttgggcactgtgaaggcaatgatggtggcattcttagtggc
atcatggcagctggattcaagggtgagcttcgcggttttcaagctggagtcactttggag
gttttgcgtctagatgcatggtgttcaaacgaagatggctcactagaatgcccggcagca
tacatcgtgcaaggcttatgtcgtaggtgctgccttccagaagttattcttcgatgcatg
caggtttctgtggctctgatggagttgggtttggaaccgaaatgccatgatcagttgatc
gaactcgtggcgagctctgaatctgggttttctgatttgttcagccagcaacaattcgag
gaatttttgatacttgagagagagtacacattacgcaaaatggagcttggagagccttct
tcctga
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integrated database retrieval system
