Cucurbita pepo subsp. pepo (vegetable marrow): 111807742
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Entry
111807742 CDS
T05351
Name
(RefSeq) SEC12-like protein 1
KO
K14003
prolactin regulatory element-binding protein
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111807742
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpep04131
]
111807742
Membrane trafficking [BR:
cpep04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
111807742
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
WD40_Prp19
EIF3I
WDR55
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_Vps41
Beta-prop_EML
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
111807742
NCBI-ProteinID:
XP_023549412
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Position
LG01:18739743..18743377
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AA seq
392 aa
AA seq
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MGGGGGSNPGPVSCGSWIRRPENVNLALIGRSRRPDSSPSVLEIFSFDPKITSLSASPLT
EFVFEECDGDLVSVAVHPSGDEIVCSTTQGGCKLFELCGQELNVKLLMKELPPLNDVGSQ
NCLAFSVDGSKLATGGVNGHLRILEWPSLRPILDEPSAHKSVRDMDFSLDSEFLASTSSD
GSARVWKTDDGVPITTLTRSADEKIELCRFSKDGTKPFLFCTVQRGEKAVTAVWDISNWK
RIGYKRLLRKPACVMSISRDGKYLALGSKDGDVCVAEVKKMEVSHMSKRLHLGTSIKTLE
FCPSERVVLTSSVEWGALVTKLNVPADWKEWQIYLLLVSLFAASAVVFYIFYENSDSFWQ
FPLGRDQPARPRFDSFVGDSQYADDPFGPVDM
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgggaggcggcggcgggtcgaatccaggtcccgtttcgtgtgggtcgtggattcggagg
cccgagaatgtgaacttagcgcttattgggaggtctaggcgaccggattcatctccttct
gtgctcgagatcttttcgtttgatcccaagatcacttctctctcggcctctcctctgact
gaattcgtgtttgaagaatgcgatggtgatcttgttagtgttgctgttcatcccagcggg
gatgaaattgtgtgttctaccactcaaggtggatgcaaattattcgagctgtgtggtcaa
gaattaaacgtgaagctgttgatgaaggaattgcctccactgaatgacgtcggttctcag
aattgtctcgctttcagtgtcgatggttctaaacttgctacgggtggggtgaatggacac
ctcagaatcttagagtggcctagcctgcgccccattttagacgaaccaagtgcgcataaa
tctgtcagggatatggactttagcctagactcagagttcttggcttctacatccagcgat
ggatcagccagagtttggaaaactgatgatggagttcctataactactttaacccggagt
gcggatgagaaaatcgagctctgtcgattttccaaggatggcactaaaccatttttattt
tgcaccgtccaaagaggcgagaaggcggtcactgccgtttgggacatcagtaactggaaa
agaattgggtataagaggttgctgagaaagcctgcttgtgtaatgtccatcagtcgagat
ggaaaatatttggctttgggaagcaaggatggggatgtatgtgtggctgaagtaaagaaa
atggaagtcagtcatatgagcaagaggctgcatcttggtacatccataaaaaccttagag
ttctgccccagtgaaagggttgttcttactagttcagtcgaatggggggctttggtgact
aagctaaatgttcctgctgactggaaagagtggcagatatatttgctgctcgtaagtcta
ttcgctgcatcggctgttgttttttatatcttctacgagaattcggattcgttttggcaa
ttccctcttggaagagatcagccagcaagacccaggtttgattcctttgtaggagattca
cagtatgctgacgatccatttggaccagttgacatgtga
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