Cucurbita pepo subsp. pepo (vegetable marrow): 111807989
Help
Entry
111807989 CDS
T05351
Name
(RefSeq) protein RDM16-like isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111807989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpep03041
]
111807989
Spliceosome [BR:
cpep03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
111807989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
111807989
NCBI-ProteinID:
XP_023549546
LinkDB
All DBs
Position
LG01:1222637..1228513
Genome browser
AA seq
905 aa
AA seq
DB search
MDRVTEKERSSKRSREERNGDHKHRSRDAEEKHFSKDEKHRESDHSHRRRHHRSDRDSKL
ERSHESRDLKHRRDRSPDERESSQDRDFKRERSYDVRDERERSRDRVSSKRERSSEPRGE
REGSKERGKLREVRREQSEDEYEREGSLGPNQNSVRSNKRKERGGSEDRFDGGEKRARAL
EDGKEVNVAEMDDRKERRRFADGEKDDEANMSGRGKRERKRFGDRAKEEDNGGNVDGKVQ
VGGTSDEKRSMGNGSSVEHIDMSSSVPQNLLHPGHSHPIKVSSISTTNENKGVSIARSHE
VHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKKDGWSSSASSS
AVKSEEKAKPAGGLLGLTATTNVTTTLSAGVASSSSTLPAANALGGGINVPASLTSIPHF
EAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVSQKPSKAPVLRLDALGREIDEQ
GNVVNLTKPSDLSTLKVNINKQKKDAFQILKPELDVDPESNPHYDERMGINKTKLLRPKR
MSFLFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINPNLIEVSERVV
KEKTKEPIPEIEWWDVPLLHSGTYEHVGDGSVADDKIRKDKITIYVEHPRPIEPPAEPAP
PPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQD
PTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFEDTNSLETIVSVYKINDL
SHPQARFKVDVNARENRLSGCAVICDNISVLVVEGGSKSIKRYGKLMLKRINWAASVKEE
EEEDENDDKPVNKCSLVWQGSVAKSSFHKFSIQECMTEAAARKIFADAGVGHYWDLAVNF
SDDLI
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atggacagggttaccgagaaggagagatcaagcaagcgttctcgagaagaacgcaatggt
gaccacaagcatcgaagtcgagacgccgaggaaaagcatttctccaaggatgaaaagcac
cgtgagtccgatcattcccatcgtcggcgtcaccatcggtcggaccgtgattcaaagctt
gagcgttcgcatgagtcgcgcgatctcaaacatcggcgtgataggtctcccgatgagcgt
gagagctcccaagatcgagattttaagcgggaaagatcttatgatgttagggatgagaga
gagaggagtagagatagggtttcgtctaagcgagagcggtcgagtgagccgagaggggag
agagagggcagcaaggagaggggcaagctgcgcgaggttaggcgcgagcagtcggaagat
gagtatgaacgggaaggatcgttggggccaaaccagaattctgtacgttcaaacaaaagg
aaggagaggggaggaagtgaggataggttcgatggtggtgagaagagagctagagcttta
gaagatgggaaggaagtgaatgtagctgagatggatgacagaaaggagcggaggagattt
gccgacggtgagaaagatgatgaagcaaacatgagtggtaggggaaagagggagaggaag
cggtttggggatcgggcaaaggaagaggataatggtggaaatgttgatgggaaagttcag
gttggaggcacctctgatgagaaaaggtccatggggaatggatcttcggtggaacatatt
gatatgtcatctagtgtgccccagaatttgttacatcctggtcattcccatcctatcaag
gtatcttcaatttctaccacaaatgaaaataagggagttagtattgccagatctcatgag
gttcatggaaaatctagtacagatgggacatcttcaaccgcggggaaaagtggaaatctc
tctcttgatgctttagcaaaagctaagaaagctttacagatgcagaaagaattggccgag
aagttgaagaaaattcccttgatgaagaaggatgggtggtcaagttctgcaagtagctca
gctgtgaaatcggaggagaaagctaagccagcaggtggtttattggggctaacggcaact
acaaatgtcaccactaccctttctgctggggtagcatcaagttcgtcgaccttaccagct
gccaacgcacttggtggtggtattaatgttccagctagccttacctctataccccatttt
gaagctgtcaaacgtgcacaggagcttgctgccaggatgggatttcgccaggatccagag
tttgctcctcttataaatttgtttccggggaatgtagcaactgatgttgctgtttcacag
aagccaagcaaggctcctgtgcttcgccttgatgcactcggcagggaaatagacgaacaa
ggaaatgttgtcaatttaaccaaacccagcgacctcagcactctaaaggttaacatcaac
aaacagaaaaaggatgcatttcaaattcttaaacctgaacttgatgtggatcccgaatca
aatcctcattatgatgagaggatgggtataaataaaactaaactgttaaggccaaagagg
atgagtttcctgttcgttgaggaggggaaatggtccaaggaggctgaaaccataaaatta
aggagtaaatttggagaggcacaagctaaagaacgaagggagaagcaggcacaattggcc
aaggccaaggctgcacctgatataaatccaaatctgattgaggtatcggagagagttgtg
aaagaaaaaacaaaagaaccaattcctgaaatcgagtggtgggatgtccctcttttgcat
tctggcacatatgagcatgtgggagatggttctgtggctgatgataaaataaggaaggat
aagattaccatatatgtggagcatcctcgtcctattgaacctcctgctgaaccagctcct
ccgcctcctcaaccactaaagctaacaaagaaggagcagaaaaaactccgtacgcagcgt
cgtctggcgaaggagaaagatagacaggagatgattagacaaggcctgatagaaccacct
aaaccaaaagttaaaatgagcaatttaatgaaagttcttggctcagaagcaacccaagac
cctacaaaacttgagaaagagattcgtgctgcagctgctgagagggaacaagctcacata
gatagaaatattgcacgaaaactgaccccagcagaacgccgtgaaaagaaagaacgcaag
ctttttgaggatacaaattcactggagacaattgtatccgtttacaagatcaatgattta
tcacacccacaggcccggtttaaagttgatgttaatgctagagagaaccgtttgagtgga
tgtgctgtgatatgtgacaacatcagtgttttggtcgttgaagggggcagcaaatccatc
aagaggtatgggaagcttatgcttaagcgcataaattgggccgcttccgtgaaagaggaa
gaagaggaggatgaaaatgacgacaagcccgttaataaatgttcattggtatggcaagga
agtgttgccaaatctagcttccataaattttctatccaggagtgcatgacggaggcagct
gctaggaagatttttgctgatgctggtgttggtcattattgggatctcgccgttaacttt
tctgatgatctaatataa
DBGET
integrated database retrieval system
