KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111807995
Entry
111807995         CDS       T05351                                 
Name
(RefSeq) ras-related protein RABF1-like isoform X1
  KO
K07887  Ras-related protein Rab-5A
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04144  Endocytosis
cpep04145  Phagosome
cpep04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    111807995
   04145 Phagosome
    111807995
   04148 Efferocytosis
    111807995
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cpep04131]
    111807995
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cpep04147]
    111807995
   04031 GTP-binding proteins [BR:cpep04031]
    111807995
Membrane trafficking [BR:cpep04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    111807995
 Endosome - Lysosome transport
    111807995
Exosome [BR:cpep04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   111807995
  Exosomal proteins of other body fluids (saliva and urine)
   111807995
  Exosomal proteins of colorectal cancer cells
   111807995
  Exosomal proteins of bladder cancer cells
   111807995
GTP-binding proteins [BR:cpep04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    111807995
SSDB
Motif
Pfam: Ras Roc Arf RsgA_GTPase Gtr1_RagA GTP_EFTU MMR_HSR1 ATPase AAA_7 G-alpha FeoB_N AAA_16
Other DBs
NCBI-GeneID: 111807995
NCBI-ProteinID: XP_023549512
LinkDB
Position
LG13:6886747..6892121
AA seq 199 aa
MGCSSSLPDRASGRSGVLNPENNAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS
KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF
AKAQYWVKELQKHGSPDIILALVGNKADLLEKRKVSVQDGTEYAEKNGMFFIETSAKTAD
NINELFEEIAKRLPRPTSS
NT seq 600 nt   +upstreamnt  +downstreamnt
atgggctgctcctcgtctctccctgacagggcttctgggcgatcgggtgtgcttaatcca
gagaacaatgctgctgattccaagaatttgcgcgtaaagcttgtcctgctaggtgattct
ggtgttggtaaaagctgtattgttctccgctttgtccgtggtcagtttgatccgacgtct
aaggttactgttggagcatcattcttatcacaaacaatagctttacaagattccacaacg
gtaaaattcgaaatatgggataccgctgggcaagagaggtatgctgcattagctccactt
tactatcgaggtgctgcagttgcagttattgtatatgatataacaagctcagattccttc
gccaaagcacaatattgggttaaggagctacagaagcatggcagccctgatatcattttg
gcactggtcggtaacaaagccgatcttctagagaaaaggaaagtatctgttcaggatggg
actgagtatgcagagaagaatggaatgttctttattgagacatctgcaaagactgcagat
aatataaacgagctgtttgaggagatagcgaagcgcttgccacgaccaacttcctcgtga

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