Cucurbita pepo subsp. pepo (vegetable marrow): 111808000
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Entry
111808000 CDS
T05351
Name
(RefSeq) transcription factor TCP21-like
KO
K16221
transcription factor TCP21 (protein CCA1 HIKING EXPEDITION)
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
111808000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpep03000
]
111808000
Transcription factors [BR:
cpep03000
]
Eukaryotic type
Other transcription factors
TCP
111808000
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GFIT
Motif
Pfam:
TCP
Motif
Other DBs
NCBI-GeneID:
111808000
NCBI-ProteinID:
XP_023549520
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Position
LG13:complement(5276512..5278325)
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AA seq
254 aa
AA seq
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MSGSDGVNCNNGAIIDLSQTNNNGGLAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQL
TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGSAAAASSLDHKPL
LAPAPFILGKRVRTDDDGDNKDDGSGGGGGGGGVSVGSTVSSFMGTAAAGGYWAIPTRPD
FGQVWSFAAAAAAAPEMVIQPTAVSHPASLFVQQQSMGEASAAKVGNYLPGHLNLLASLS
GGPGSSGRRDNDHR
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgtctggttctgacggcgtcaactgcaacaatggcgccattattgatctttctcagact
aacaacaatggcggtttggccgtcaaaaaacctccgtccaaggaccgtcacagcaaggtc
gatggccgtggccgccgtattcgtatgccgatcatttgtgctgctcgggtcttccaactt
actcgcgagttgggccacaaatctgacggtcaaaccatcgagtggcttctccgtcaagcg
gagccttcgattattgctgccactggcaccggcactactccggctagcttctccaccatt
tccgcttcactccgcggtggttctgctgctgctgcttcgtctctcgaccataagccgctt
ttggctccggcgccgttcattcttggcaagcgcgttagaacggacgacgatggagataat
aaagacgacggtagcggtggcggtggcggtggtggtggcgtttcggttggctctactgtg
agttcgtttatgggtacggctgccgcgggtggatattgggcgattcctacgaggccggat
ttcggacaggtgtggagctttgcagcagcggcggcggcggctccggagatggtgattcaa
ccgaccgcggtttctcacccggcgtcgctgttcgttcagcagcaatcgatgggagaagcg
tcggcggcgaaagtgggaaattaccttccagggcatctgaatttgcttgcttctttatct
ggtggaccgggaagttccggccgaagagacaacgaccaccgttga
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