KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111808152
Entry
111808152         CDS       T05351                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RHA1B
  KO
K16281  RING-H2 zinc finger protein RHA1
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cpep04121]
    111808152
Ubiquitin system [BR:cpep04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    111808152
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-C3HC4 zf-rbx1 zf-RING_5 zf-C3HC4_2 zf-RING_UBOX zf-ANAPC11 zf-RING_16 Prok-RING_1 zf-C3HC4_3 RINGv CxC4 zf_RING_Vps8_fungal zf-RING_4 zf-C3H2C3 zf-RING-like zf-RING_Vps41
Other DBs
NCBI-GeneID: 111808152
NCBI-ProteinID: XP_023549736
LinkDB
Position
LG13:1026492..1027296
AA seq 178 aa
MGFPASYTELLLPKLFIHVLSVLGFLRKLISLLFRLLGLQDFLEPDIPWPNQSDSFTTGP
LTDLDPLSAAVLREILPVVKFSELLDPPESCAVCLYEFESDDEIRRLANCRHIFHRGCLD
RWIGYGQRTCPLCRTVFIPGDLRSGVCNFDDRLWEDSEIFEALHSDSSSSSTLLSAGL
NT seq 537 nt   +upstreamnt  +downstreamnt
atgggctttcctgcaagctacactgagcttcttcttccaaagctcttcatccacgtactc
tccgtcctcggcttcctcaggaagcttatctcccttctcttccgcctcctagggcttcaa
gattttctcgaaccggacattccctggcccaatcagtccgattcctttactacgggaccg
ttgacggaccttgatcctctctccgcggcagttctccgtgagattctccccgtcgtgaag
ttttcggagcttttggatccgccggagagttgcgccgtgtgcctctacgagtttgagtct
gacgacgagatccgccgcctcgctaactgtcgccatatcttccaccgaggatgcctcgat
cggtggatcggttatggacagaggacctgtccgttgtgccggacggtgttcattccaggc
gatttgcggagcggtgtttgtaattttgacgataggctttgggaggattcggaaatcttt
gaagcactccacagcgattcttcttcttcttcgactcttctctctgctggtttgtag

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