KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111808172
Entry
111808172         CDS       T05351                                 
Name
(RefSeq) lysine-specific demethylase 5A isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cpep01009]
    111808172
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cpep03036]
    111808172
Enzymes [BR:cpep01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     111808172
Protein phosphatases and associated proteins [BR:cpep01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     111808172
Chromosome and associated proteins [BR:cpep03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    111808172
SSDB
Motif
Pfam: JmjC PLU-1 PHD JmjN zf-C5HC2 ARID KDM5_C-hel PHDvar_NSD BT_3657-like_N eIF3_p135
Other DBs
NCBI-GeneID: 111808172
NCBI-ProteinID: XP_023549767
LinkDB
Position
LG13:1169285..1191155
AA seq 1857 aa
MGKGRPRAVEKGVLGQNLSVCSSASLNIPSGPAFYPTEDEFRDPLEYIYKIRPEAEPYGI
CRIVPPKNWKPPFALRLDSFTFPTKTQAIHQLQVRPAACDSETFELEYNRFLDGHFGKKM
KKKVVFEGDELDLCKLFNAVKRYGGYDKVVKEKRWGEVFRFVRSTRKISECAKHVLCQLY
REHLYDYENYYNQLNKDVTKSSKRKMQNEKLTECLAEISTSKRRRQNTDDCRVKVSKLKD
EEDNDQICEQCKSGLHGEVMLLCDRCDKGWHLYCLSPPLKQVPPGNWYCLDCLNSEKDSF
GFVPGKSFSLEAFKRMDCRAKKKWFGSGSASRAQIEKKFWEIVEGSFGEVEVKYGSDLDT
SVYGSGFPRENVQRPESIDAKLWDEYCNSPWNLNNLPKLEGSMLRAIRHNITGVMVPWLY
IGMLFSSFCWHFEDHCFYSMNYLHWGDPKCWYSVPGSEATAFEKVMRNNLPDLFDAQPDL
LFQLVTMLNPSVLQDNGVPVYTVQQEPGNFVVTFPRSYHGGFNLGLNCAEAVNFAPADWM
PYGGFGEELYQLYHKPAVFSHEELICVIAKMDCNDRVSPYLKKELLRIYSKEKSWREQLW
KNGVIRSSPLPPRKCPEYISTEEDPTCVICKKYLYLSAIGCHCRRSAFVCLEHWQHLCEC
KYSRRRLRYRYTLAELYDLIAIVDRSIFGETTESKDLRRVGLCFTERCTLTKKVKGGRVT
LTQLAEKWLLHSSKILQDPFSNEACVKVMREAEQFLWAGHDMDHVRDVVRNLDETQKWVQ
GIGDSICKIEAWSCDHSGSLEKICMDHVNNLLSLPPISCNHPGYLKLKDYVEEAKMLIQD
IDNTLSRCPNVSEWEILYSRVCAFPVHIKESEKLSEKISIAKSCIESVREILEKHPAAFE
VEVLYKLKFKILELGIQLPETETVLDLIRQAELCRSKCEEIMKAPMNLKTVKQFLQESNG
FAVNIPELKLLRQYHDDAVSWKGRLNAIMVNVHEREDQHNVIEELNCILRDGLSLTIKVD
DVPLVEVELKKASVREKAQKVIQSNTSNIWHLRDTKVTMEFMQKLMEEAVELELDKEKLF
ADIRGVLDSAMSVEKRAMDFLSHGSRLSDFEEIIRTSEDLCVILPSLHDVKNEVSLAKSW
LNFSKPFLESVLPMSSARRSRLKIETLKELVSQSKLLKVTLDESRMLETVLRNCENWKEG
ANSLLQDIDILLNASDIGDGLSNCLIPKIEQLIDRINTAITASLSLDYDFREISRLQSAC
STLIWCNKVLSLCHVIPSYQDVESLLSVEENSSCLYASGVMWSLLVEGVKWLKQALEVIP
GTCNFKQRKLSDAEELLSKFQSIRINFSAMNDQLVNAIRTHKLWLEEVRQFFVIKRAERS
WTQLLKLKEKGDAVSFNCSELQLILSEAEKIEKWKKHMREIMKTSFGDESSLLGCLLEIK
KSLDRSLYIYEKSLLYTDQNLCVCCSSDSQDQHLFTCTVCKESYHLQCLGQAKEKTNSTD
VFMCYYCCSLRAVSSIDKSGGPLRFLANRPELGMLTKLKSDALNFCVWMEEEDVLKQLVE
QALVCKSHLTEVLDFASRCLDKDFSTTCKRLTVALKAMDVAGINDQEGKCGLEMELVRNS
WRFRVKEALEGSEKPTMQQVLELLEEGSAISIPLEDFYRKKLLEVKIVCSKWRSLARKIS
ADCGALELEKVFELIVEGENLPAYLERELKLLRNRSMLYCICRKPNDRRPMLACDICEEW
YHFDCVKIESTPKIYICPACKPQVDNKMLIQLSTEYESSIGTKFVEPKTPSPQRMKQRSK
PKKTKRNLVRSVTDCYREIRCPSGIERLWWQNRKPFRRVTRRRAEFGSLSPFFLIEQ
NT seq 5574 nt   +upstreamnt  +downstreamnt
atggggaaaggaagaccaagagctgtggaaaagggggttttagggcaaaatttgagtgta
tgttcatctgcttcattgaatataccatctggacctgcgttttatccaactgaagatgaa
tttagagacccattggagtatatatataagatcagaccagaggctgagccgtacgggatt
tgtaggatagtgcctcctaagaactggaaacctccatttgcattgagattagattctttt
acatttcccacaaaaactcaggccattcatcaattgcaggttagacctgctgcctgtgat
tcagagacgtttgagcttgaatataataggtttttggatggtcattttggcaaaaagatg
aagaagaaggttgtttttgagggagatgagttggatttgtgcaagttatttaatgcagtg
aagcgttatggtgggtatgataaggttgttaaggagaagaggtggggtgaggtttttagg
tttgttagatcaacaaggaagatttcagagtgtgctaagcatgtgctttgtcaattgtat
cgagaacatttatatgattatgagaactattataatcaattgaataaggatgtcacgaag
agttcaaaaaggaaaatgcaaaatgagaagcttacggagtgcttggccgaaatttcaacc
tctaaaaggaggcggcagaacaccgacgattgtagagtcaaggtctcaaagttaaaagac
gaagaagataacgatcagatttgtgagcaatgtaaaagtggattacatggtgaagtgatg
cttctatgcgataggtgcgacaaggggtggcacttatattgtctctcacctcctttaaag
caagttccaccagggaactggtattgtttagattgcttgaattcagagaaggatagtttt
ggttttgtgcctggtaaaagcttctccctggaagcatttaagcgtatggattgcagggcc
aagaagaaatggtttggctcagggtctgcttctagggcgcaaattgagaagaagttttgg
gaaattgtggaaggttcatttggtgaggttgaagttaaatatggcagtgacttggacaca
tcagtttatggcagtggctttcctcgtgaaaatgtccagaggccagaatcaattgatgct
aagctgtgggatgaatattgcaatagtccttggaatctcaataacttgcccaaattggaa
gggtccatgcttagagccattcgtcacaatattactggtgttatggtgccctggttgtat
attgggatgctattttcatcgttctgctggcattttgaagatcattgtttctattcaatg
aattacctgcactggggtgacccaaaatgctggtatagtgtacctggtagtgaagctact
gcttttgagaaggttatgcggaataaccttcctgatctttttgacgcacaacctgattta
cttttccaacttgtcaccatgttgaatccatccgtcttacaagacaatggcgtacctgtt
tatactgtacagcaggagcctggaaatttcgttgtgaccttccctagatcttaccatggg
ggttttaatcttggattaaattgtgctgaggccgtaaattttgctccagctgactggatg
ccttatggtgggtttggagaagaactgtatcagctttatcacaaacctgctgttttttct
cacgaggagcttatctgtgtgatagcgaagatggactgcaacgaccgagtttctccttac
ctgaagaaagagttacttaggatatattctaaggagaaaagttggagagaacaactttgg
aaaaatggtgtaatcagatcttctccattgcctcctcggaagtgtcctgaatatatcagt
actgaggaggatccaacatgcgtaatttgtaagaagtacctttatctttcagctataggt
tgccattgtaggagatctgcttttgtatgtttagagcactggcaacacctttgtgaatgc
aagtacagcaggcggcgccttcggtaccgttatacacttgcagaactatatgatttgatt
gctatagttgatagatctatttttggggagacaactgaaagtaaggatttgcgacgggtg
ggcttatgcttcactgagcgatgcactttgacaaaaaaggtgaaaggtggtcgtgtcact
ctgactcaacttgcagaaaaatggttactgcattcgagtaagattcttcaagatccgttc
tcaaatgaggcatgtgttaaggttatgagagaagccgagcaatttctttgggctggtcat
gacatggatcacgttcgtgatgtggtaagaaacttggacgaaactcaaaagtgggttcaa
ggcatcggggattccatttgtaaaattgaagcgtggtcatgtgatcattctggaagttta
gagaaaatttgcatggatcatgtaaataatttgttgagtctacccccaatatcatgtaac
catcctgggtaccttaagttgaaggattatgtcgaagaagcaaagatgttgatacaagat
attgataataccttatcaagatgccctaatgtttctgaatgggaaattttgtactcgaga
gtgtgtgcctttccagtccatatcaaagaaagtgagaagttatcggaaaaaatatcaata
gcgaagtcttgcatagaaagtgtcagagaaattttggagaaacacccggctgcttttgag
gttgaggttctttacaagttgaagtttaagattttggaactaggaatccagcttccagag
acagaaacggtactggatttaataaggcaagctgaactatgtcgttctaaatgtgaagaa
attatgaaggctcccatgaatttgaagactgtcaaacagttccttcaagaatcaaacggt
tttgctgttaatatacctgaactgaagcttttaagacagtatcatgatgatgctgtttca
tggaagggtcgtcttaatgctattatggttaatgttcatgaacgggaggatcaacataat
gtaatcgaagaattaaattgcattctaagagatggattatcactgacaataaaagttgat
gatgtacctttagttgaggttgagttgaagaaggcttctgtcagggaaaaagctcaaaag
gtgattcaaagtaacacttcaaatatttggcatttacgcgataccaaggttactatggaa
ttcatgcagaaactgatggaggaggctgttgaattagaacttgataaggaaaaattgttt
gctgatattcgtggagttctcgattcagcaatgagtgtagagaagagagcaatggatttt
ctatcccatgggtcccggttatctgatttcgaagagattataaggacttctgaagattta
tgtgttattctaccttctcttcatgatgtaaagaatgaagtatccttggccaaatcctgg
ttaaatttttcgaagcctttcttagaatctgttctccctatgtcttctgcacgaagatcg
cgactgaaaattgaaacactaaaggagttggtttctcagtcaaaactccttaaggttact
ttggacgaaagcagaatgcttgaaaccgtactgagaaactgcgagaattggaaagaggga
gcaaactctttattgcaagatattgatattcttttgaatgcgagtgatataggagatggc
ctgagcaattgtcttattcctaagattgaacaattaattgatagaatcaatactgctatt
acagccagtttatctcttgattatgacttccgtgagatttccagacttcaaagtgcttgt
tctacactcatctggtgcaataaagttctttctctttgccatgttattccttcttatcag
gatgttgagagcttgttgagtgttgaagagaatagttcatgtttatatgcctccggtgtt
atgtggagcttattggtggagggtgtcaaatggctgaagcaagccttagaggtgattcct
ggaacgtgcaattttaaacaaagaaagttgagtgatgctgaggaattactttccaaattt
cagagtatcagaatcaacttctcagccatgaatgatcaacttgtaaatgctattcggacg
cacaagttgtggctggaagaagtacgtcaattttttgttattaagcgtgctgaacgatcg
tggactcagttattaaaacttaaggaaaaaggagatgccgtttccttcaattgttctgag
ctacaattaattttatccgaagctgaaaagattgaaaagtggaagaaacatatgcgggaa
atcatgaaaacatcttttggggatgaaagttctttgcttggttgtctactagagataaag
aaatcactggatagatccctatacatatatgagaagtcgttgctctacactgatcaaaac
ttatgtgtgtgttgttctagcgattcacaggatcagcatctttttacttgcactgtctgt
aaagaaagctaccatttgcagtgcctaggacaagcaaaagaaaaaacaaacagtacagat
gtctttatgtgctattattgctgtagcttaagggctgtgtcctcaattgataaaagtgga
ggtcccttgagatttttagcaaatcgtcctgaactaggaatgctcactaagctcaaatct
gatgccttgaacttttgtgtctggatggaagaggaggatgtattaaagcaactggtagag
caggctttagtctgcaaatctcacttgacagaagtcttggactttgcctcacgttgtctc
gataaagattttagtaccacctgcaagaggttaacagtagctttaaaggctatggacgtt
gcaggcattaacgatcaggaaggtaagtgtggccttgagatggaactagtgaggaactcg
tggagattcagagtcaaggaagctcttgaaggttctgaaaaaccaacaatgcaacaggtc
ctggagcttctcgaagagggatcggccataagcattccgcttgaagatttctacagaaag
aaacttttagaagtgaagattgtttgctcgaagtggagaagtcttgcaaggaagatttca
gctgactgtggggctcttgaattggagaaagttttcgaactgatcgtggagggtgaaaat
ttacctgcatacctcgagagggagctcaagttattgagaaatcgaagtatgctttattgc
atttgccgaaagcctaacgatcgcagaccaatgcttgcttgtgatatttgtgaagagtgg
tatcactttgattgtgtcaagattgaatctactccgaagatatacatctgcccagcctgc
aaaccgcaagtagacaataaaatgttgattcagctatcaacagaatatgaaagttcaata
ggcacaaagtttgtggagccaaagaccccttctcctcaacgcatgaagcagagatcgaaa
ccgaaaaaaacaaagcgaaatttagttcgaagcgtgacggattgctacagagaaatcagg
tgcccaagtggaatagaacgcttatggtggcaaaacaggaagcctttcaggagagttacg
agaaggagagcagagtttgggagtctctcaccatttttcctcattgaacaataa

DBGET integrated database retrieval system