Cucurbita pepo subsp. pepo (vegetable marrow): 111808234
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Entry
111808234 CDS
T05351
Name
(RefSeq) UPF0400 protein C337.03-like isoform X1
KO
K15559
regulator of Ty1 transposition protein 103
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpep03021
]
111808234
Transcription machinery [BR:
cpep03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
111808234
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
ALIX_LYPXL_bnd
Motif
Other DBs
NCBI-GeneID:
111808234
NCBI-ProteinID:
XP_023549864
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Position
LG13:complement(9088193..9093396)
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AA seq
528 aa
AA seq
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MGGTFNPQILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAY
LYLANDILQNSRRKGSEFVGEFWKVLPDALRDVIEHGDDFGRNAALRLIGIWEERKVFGS
RGQSLKEEIMGKSLETGNRNGKHFSSKLKQSGSISLDKIVSGYQVVYRSEVDEDAVLSKC
RNSISYLEKLDKEIGADVNSGQYRGSSAAEDLRGHHSILRDCIEQLTTIETSRASLVSHL
REALQEQEFKLEQVRNQLQVSHSQSEQTQNLCRQFLNGENVEAMTKEEASKDAQTSIAPH
TLVPRERDQSAPVMYAPSLPFPAKPGPIEEDPRKSAAAAVAAKLTASTSSVQMLSYVLSS
LASEGVIGNPNKELPGDYPSEKRLKLENDQSPYTLPPNPQRPPVPPFPHPESLQHNASST
SQQYTPSDLPPPPSSSPPPVPPLPPVGQLPLPQFTQNAAGSVSSIAYSYSMTQSLQPLAR
PGYPNLGAPVTGMSPCTIPTNSYQSFQGSDGNFYNPSSSMPMAPISRQ
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgggtggtacgttcaatccacaaattttggtggacaagctagccaggctcaacaactca
caggcgagcattgagactttatcccactggtgtatatttcacatgaacaaagccaagcaa
gttgtagaaacatgggataagcagtttcattgttctccacgtgagcagaggttggcctat
ctatatcttgcaaatgacattttgcagaacagtaggcgaaaaggttcagagtttgttggt
gaattttggaaagtccttccagatgcacttcgtgatgtaattgagcacggtgatgatttt
ggtagaaatgctgccctacgactgattggcatttgggaggagagaaaagtttttggatct
cgaggacagagtcttaaagaagagataatgggaaagagtttggaaactggtaaccgaaat
gggaagcatttcagcagtaaactgaaacaatctggcagcatatcattggataaaatagtt
tctggctaccaagttgtttacagaagtgaggtcgatgaagatgcagtattgagcaaatgc
aggaattctattagctatcttgagaaactggacaaagaaattggcgctgatgtcaattca
gggcaataccgtggatcatcagctgcagaggatctgcggggacatcatagcattttgagg
gattgcatcgaacaattaacaacaattgaaacttcaagggcaagtcttgtgtctcatctg
agagaggctcttcaagaacaggaattcaaattggagcaagttcgaaatcaacttcaggtt
tctcattcccagtcggaacaaactcagaatctgtgcaggcagtttttaaatggtgaaaat
gtggaagctatgactaaggaggaggcctcaaaagatgctcagacctcgatagcaccacac
acccttgtaccaagggagagagatcaatcagccccagtaatgtatgcaccctcattacct
tttcctgcaaaacctggacctattgaggaagatccccgcaagtctgctgctgctgcagtg
gcagctaagctaactgcatcgacatcctcggttcagatgctctcttacgtcctatcttct
ctggcatccgagggtgtaattggaaacccaaataaagagttacctggtgattatccatct
gagaagaggctgaaacttgaaaatgaccagtcgccttacacattgcctcccaatcctcag
cgaccacccgtccctcccttcccacacccggagtctctccaacataacgcctcgtccacc
agtcaacaatacactccttctgacctgccacctcccccgtcgtcatctccaccgccagtg
cctccattgcctcctgttgggcagctccctttgccccagttcacacagaatgctgctggg
tcagtaagtagcatagcttacagttacagtatgacacaatcactgcaaccattagcgagg
cctgggtacccgaatttaggtgccccagtgacggggatgtctccttgtacaataccaacg
aattcttaccagagcttccagggttcagatggtaatttctataatccgtcttcatccatg
ccgatggcacccatttctaggcaatag
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